Information for 5-TGAAAWKAKWCATKCW (Motif 9)

C G A T A C T G C G T A C G T A C G T A G C T A A C T G C G T A A C T G C G A T G T A C C G T A A G C T A C G T A G T C C G T A
Reverse Opposite:
C G A T A C T G G T C A C T G A A C G T A C T G C G T A G T A C A C G T G T A C C G A T C G A T C G A T A C G T A G T C C G T A
p-value:1e-10
log p-value:-2.525e+01
Information Content per bp:1.840
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.7 +/- 26.5bp
Average Position of motif in Background55.3 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JDP2/MA0655.1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TGAAAWKAKWCATKCW
----ATGAGTCAT---
 C G A T A C T G C G T A C G T A C G T A G C T A A C T G C G T A A C T G C G A T G T A C C G T A A G C T A C G T A G T C C G T A
A C G T A C G T A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGAAAWKAKWCATKCW
---GATGAGTCATN--
 C G A T A C T G C G T A C G T A C G T A G C T A A C T G C G T A A C T G C G A T G T A C C G T A A G C T A C G T A G T C C G T A
A C G T A C G T A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGAAAWKAKWCATKCW
-GAAATGACTCA----
 C G A T A C T G C G T A C G T A C G T A G C T A A C T G C G T A A C T G C G A T G T A C C G T A A G C T A C G T A G T C C G T A
A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGAAAWKAKWCATKCW
---GAATATTCAT---
 C G A T A C T G C G T A C G T A C G T A G C T A A C T G C G T A A C T G C G A T G T A C C G T A A G C T A C G T A G T C C G T A
A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGAAAWKAKWCATKCW----
----NNCATTCATTCATNNN
 C G A T A C T G C G T A C G T A C G T A G C T A A C T G C G T A A C T G C G A T G T A C C G T A A G C T A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGAAAWKAKWCATKCW
-NNAATTAGTCACGGT
 C G A T A C T G C G T A C G T A C G T A G C T A A C T G C G T A A C T G C G A T G T A C C G T A A G C T A C G T A G T C C G T A
A C G T A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGAAAWKAKWCATKCW
---GATGAGTCATCC-
 C G A T A C T G C G T A C G T A C G T A G C T A A C T G C G T A A C T G C G A T G T A C C G T A A G C T A C G T A G T C C G T A
A C G T A C G T A C G T C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGAAAWKAKWCATKCW
AGGAGATGACTCAT---
 A C G T C G A T A C T G C G T A C G T A C G T A G C T A A C T G C G T A A C T G C G A T G T A C C G T A A G C T A C G T A G T C C G T A
C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T A C G T A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGAAAWKAKWCATKCW
--NNATGASTCATH--
 C G A T A C T G C G T A C G T A C G T A G C T A A C T G C G T A A C T G C G A T G T A C C G T A A G C T A C G T A G T C C G T A
A C G T A C G T A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C A C G T A C G T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGAAAWKAKWCATKCW
---DATGASTCAT---
 C G A T A C T G C G T A C G T A C G T A G C T A A C T G C G T A A C T G C G A T G T A C C G T A A G C T A C G T A G T C C G T A
A C G T A C G T A C G T C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T A C G T A C G T A C G T