Information for 5-GTCAGCAGAAAAG (Motif 3)

T A C G C G A T T A G C C G T A C T A G A G T C C G T A T C A G G C T A C T G A G T C A C G T A T C A G
Reverse Opposite:
A G T C G C A T A C G T A G C T C A G T A G T C C G A T T C A G A G T C A C G T A C T G G C T A A G T C
p-value:1e-29
log p-value:-6.681e+01
Information Content per bp:1.757
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.16%
Number of Background Sequences with motif120.2
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets51.7 +/- 25.1bp
Average Position of motif in Background50.8 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GTCAGCAGAAAAG
GTCAGCANNTN--
 T A C G C G A T T A G C C G T A C T A G A G T C C G T A T C A G G C T A C T G A G T C A C G T A T C A G
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGCAGAAAAG
TGAGTCAGCA------
 A C G T A C G T A C G T T A C G C G A T T A G C C G T A C T A G A G T C C G T A T C A G G C T A C T G A G T C A C G T A T C A G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GTCAGCAGAAAAG
CTGAGTCAGCAATTT--
 A C G T A C G T A C G T A C G T T A C G C G A T T A G C C G T A C T A G A G T C C G T A T C A G G C T A C T G A G T C A C G T A T C A G
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGCAGAAAAG
NGTCAGCANTTT--
 A C G T T A C G C G A T T A G C C G T A C T A G A G T C C G T A T C A G G C T A C T G A G T C A C G T A T C A G
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAGCAGAAAAG
NCTANGTCAGCAAATTT-
 A C G T A C G T A C G T A C G T A C G T T A C G C G A T T A G C C G T A C T A G A G T C C G T A T C A G G C T A C T G A G T C A C G T A T C A G
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTCAGCAGAAAAG
HWWGTCAGCAWWTTT-
 A C G T A C G T A C G T T A C G C G A T T A G C C G T A C T A G A G T C C G T A T C A G G C T A C T G A G T C A C G T A T C A G
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GTCAGCAGAAAAG
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T A C G T A C G T T A C G C G A T T A G C C G T A C T A G A G T C C G T A T C A G G C T A C T G A G T C A C G T A T C A G
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGCAGAAAAG
AAGTCAGCANTTTTN
 A C G T A C G T T A C G C G A T T A G C C G T A C T A G A G T C C G T A T C A G G C T A C T G A G T C A C G T A T C A G
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGCAGAAAAG
SCTGTCARCACC----
 A C G T A C G T A C G T T A C G C G A T T A G C C G T A C T A G A G T C C G T A T C A G G C T A C T G A G T C A C G T A T C A G
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTCAGCAGAAAAG
GTAAACAG-----
 T A C G C G A T T A G C C G T A C T A G A G T C C G T A T C A G G C T A C T G A G T C A C G T A T C A G
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T