Information for 4-GCTGACATCAGCA (Motif 2)

C A T G A G T C C G A T C A T G C G T A T A G C G C T A G C A T G T A C C G T A A C T G G T A C C G T A
Reverse Opposite:
G C A T A C T G G T A C C G A T A C T G C G T A C G A T A T C G G C A T G T A C C G T A A C T G G T A C
p-value:1e-31
log p-value:-7.202e+01
Information Content per bp:1.640
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif7.37%
Number of Background Sequences with motif476.7
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets56.6 +/- 24.0bp
Average Position of motif in Background49.2 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:GCTGACATCAGCA----
------GTCAGCANNTN
 C A T G A G T C C G A T C A T G C G T A T A G C G C T A G C A T G T A C C G T A A C T G G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

BATF3/MA0835.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTGACATCAGCA
TGATGACGTCATCA
 A C G T C A T G A G T C C G A T C A T G C G T A T A G C G C T A G C A T G T A C C G T A A C T G G T A C C G T A
G A C T C A T G T C G A C G A T C A T G G T C A A G T C A C T G A C G T A G T C C G T A A G C T G A T C C T G A

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GCTGACATCAGCA----
-----NGTCAGCANTTT
 C A T G A G T C C G A T C A T G C G T A T A G C G C T A G C A T G T A C C G T A A C T G G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTGACATCAGCA
NRRTGACGTCAT--
 A C G T C A T G A G T C C G A T C A T G C G T A T A G C G C T A G C A T G T A C C G T A A C T G G T A C C G T A
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCTGACATCAGCA-----
---HWWGTCAGCAWWTTT
 C A T G A G T C C G A T C A T G C G T A T A G C G C T A G C A T G T A C C G T A A C T G G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTGACATCAGCA
NGRTGACGTCAY--
 A C G T C A T G A G T C C G A T C A T G C G T A T A G C G C T A G C A T G T A C C G T A A C T G G T A C C G T A
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCTGACATCAGCA
-ATGACGTCATCN
 C A T G A G T C C G A T C A T G C G T A T A G C G C T A G C A T G T A C C G T A A C T G G T A C C G T A
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCTGACATCAGCA
---TGAGTCAGCA
 C A T G A G T C C G A T C A T G C G T A T A G C G C T A G C A T G T A C C G T A A C T G G T A C C G T A
A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTGACATCAGCA
--TGACGTCATC-
 C A T G A G T C C G A T C A T G C G T A T A G C G C T A G C A T G T A C C G T A A C T G G T A C C G T A
A C G T A C G T G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A G C T A T G C A C G T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCTGACATCAGCA----
--CTGAGTCAGCAATTT
 C A T G A G T C C G A T C A T G C G T A T A G C G C T A G C A T G T A C C G T A A C T G G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T