Information for 8-CTTGCAGGAACAA (Motif 10)

A G T C A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T C T A G C G A T A C G T A G T C A G T C C G A T A C T G A G T C G T C A C G T A A C T G
p-value:1e-10
log p-value:-2.473e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 25.9bp
Average Position of motif in Background75.8 +/- 0.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTTGCAGGAACAA
CTTCCNGGAA---
 A G T C A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A C G T A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTTGCAGGAACAA
---CCAGGAACAG
 A G T C A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A C G T A
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTTGCAGGAACAA
NNCTTCCNGGAAGN-
 A C G T A C G T A G T C A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A C G T A
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTGCAGGAACAA
NTTTCCNGGAAA--
 A C G T A G T C A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A C G T A
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTTGCAGGAACAA
NNNCTTTCCAGGAAA--
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A C G T A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTTGCAGGAACAA
TTTCCAGGAAA--
 A G T C A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A C G T A
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTTGCAGGAACAA-
TTTCCAGGAAATGG
 A G T C A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A C G T A A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CTTGCAGGAACAA---
------GGAACAAAGR
 A G T C A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTTGCAGGAACAA
NATTTCCNGGAAAT-
 A C G T A C G T A G T C A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A C G T A
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTGCAGGAACAA
NGCTTTCTAGGAAN--
 A C G T A C G T A C G T A G T C A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A C G T A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T