Information for 4-GCTAAGAACAAACAAG (Motif 13)

A C T G G T A C A C G T C G T A C G T A C T A G C G T A C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C T A G
Reverse Opposite:
A G T C A C G T A C G T C T A G A C G T A C G T A C G T A C T G A C G T G C A T A G T C A C G T A C G T G T C A A C T G A G T C
p-value:1e-8
log p-value:-1.963e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 25.5bp
Average Position of motif in Background56.4 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCTAAGAACAAACAAG--
-ATAAGAACAAAGGACTA
 A C T G G T A C A C G T C G T A C G T A C T A G C G T A C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C T A G A C G T A C G T
A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCTAAGAACAAACAAG--
-AGAAGAACAAAGGACTA
 A C T G G T A C A C G T C G T A C G T A C T A G C G T A C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C T A G A C G T A C G T
A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCTAAGAACAAACAAG--
---AACAAACAACAAGAG
 A C T G G T A C A C G T C G T A C G T A C T A G C G T A C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C T A G A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCTAAGAACAAACAAG-
-----AAACAAACATTC
 A C T G G T A C A C G T C G T A C G T A C T A G C G T A C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTAAGAACAAACAAG
AAAAATAACAAACGG-
 A C T G G T A C A C G T C G T A C G T A C T A G C G T A C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C T A G
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTAAGAACAAACAAG
NTTNAGAACAATTA--
 A C T G G T A C A C G T C G T A C G T A C T A G C G T A C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C T A G
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCTAAGAACAAACAAG
-----AAATAAACA--
 A C T G G T A C A C G T C G T A C G T A C T A G C G T A C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C T A G
A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCTAAGAACAAACAAG-
------AATAAACAATN
 A C T G G T A C A C G T C G T A C G T A C T A G C G T A C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCTAAGAACAAACAAG
----GGAACAAAGR--
 A C T G G T A C A C G T C G T A C G T A C T A G C G T A C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C T A G
A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GCTAAGAACAAACAAG
-------GTAAACAA-
 A C T G G T A C A C G T C G T A C G T A C T A G C G T A C G T A G T A C C G T A C G T A C G T A A G T C C G T A C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T