p-value: | 1e-9 |
log p-value: | -2.217e+01 |
Information Content per bp: | 1.869 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.23% |
Number of Background Sequences with motif | 30.2 |
Percentage of Background Sequences with motif | 0.06% |
Average Position of motif in Targets | 51.8 +/- 31.1bp |
Average Position of motif in Background | 45.2 +/- 33.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 1 |
Score: | 0.76 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCTTAGCAA---- CCGCATAGCAACGGA |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TGCTTAGCAA-------- TGTGACCCTTAGCAACCGATTAA |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 3 |
Score: | 0.73 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCTTAGCAA---- TACCATAGCAACGGT |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 4 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGCTTAGCAA--- -SCCTAGCAACAG |
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Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGCTTAGCAA-- TGTTKCCTAGCAACM |
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STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGCTTAGCAA TTCTNMGGAA |
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PB0022.1_Gata5_1/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGCTTAGCAA---- NTNTTCTTATCAGTNTN |
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NFIA/MA0670.1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGCTTAGCAA- -NNTTGGCANN |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGCTTAGCAA --CTTGGCAA |
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NRL/MA0842.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGCTTAGCAA--- --GTCAGCANNTN |
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