Information for 9-TTAATCATAT (Motif 9)

A C G T A C G T C G T A C G T A C G A T G A T C C G T A A G C T C G T A A C G T
Reverse Opposite:
C G T A G A C T C T G A A C G T C T A G C G T A A C G T C G A T G T C A C G T A
p-value:1e-11
log p-value:-2.727e+01
Information Content per bp:1.855
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.8 +/- 28.5bp
Average Position of motif in Background41.5 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TTAATCATAT
TCATCAATCA---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T G A T C C G T A A G C T C G T A A C G T
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTAATCATAT-
TCTTTANTAATANN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T G A T C C G T A A G C T C G T A A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

NKX6-1/MA0674.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTAATCATAT
TTAATTAN--
 A C G T A C G T C G T A C G T A C G A T G A T C C G T A A G C T C G T A A C G T
C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTAATCATAT
ATATTAATTAA--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T G A T C C G T A A G C T C G T A A C G T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTAATCATAT-
TGAGTCATTTC
 A C G T A C G T C G T A C G T A C G A T G A T C C G T A A G C T C G T A A C G T A C G T
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

PH0095.1_Lhx5/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTAATCATAT---
CGAATTAATTAAATACT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T G A T C C G T A A G C T C G T A A C G T A C G T A C G T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

PB0001.1_Arid3a_1/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTAATCATAT---
GGGTTTAATTAAAATTC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T G A T C C G T A A G C T C G T A A C G T A C G T A C G T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

Hoxd8/MA0910.1/Jaspar

Match Rank:8
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------TTAATCATAT-
NAGCCATTAATTANTTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T G A T C C G T A A G C T C G T A A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:9
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------TTAATCATAT-
NAGCCATTAATTANTTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T G A T C C G T A A G C T C G T A A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

NKX6-2/MA0675.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTAATCATAT
TTAATTAN--
 A C G T A C G T C G T A C G T A C G A T G A T C C G T A A G C T C G T A A C G T
C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G A C G T A C G T