Information for 6-CTCTGCTGCCACC (Motif 2)

A T G C A C G T A G T C A C G T C T A G A G T C A C G T A C T G A G T C A G T C G C T A A T G C A G T C
Reverse Opposite:
A C T G A T C G C A G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A T A C G C G T A A T C G
p-value:1e-21
log p-value:-5.005e+01
Information Content per bp:1.890
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 18.4bp
Average Position of motif in Background63.6 +/- 6.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CTCTGCTGCCACC-
-----ATGCCAACC
 A T G C A C G T A G T C A C G T C T A G A G T C A C G T A C T G A G T C A G T C G C T A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTCTGCTGCCACC
---TGCTGACTCA
 A T G C A C G T A G T C A C G T C T A G A G T C A C G T A C T G A G T C A G T C G C T A A T G C A G T C
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCTGCTGCCACC-----
--ACTATGCCAACCTACC
 A T G C A C G T A G T C A C G T C T A G A G T C A C G T A C T G A G T C A G T C G C T A A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCTGCTGCCACC
---VGCTGWCAVB
 A T G C A C G T A G T C A C G T C T A G A G T C A C G T A C T G A G T C A G T C G C T A A T G C A G T C
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCTGCTGCCACC
AATTTGCTGAC---
 A C G T A T G C A C G T A G T C A C G T C T A G A G T C A C G T A C T G A G T C A G T C G C T A A T G C A G T C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCTGCTGCCACC
CNGTCCTCCC---
 A T G C A C G T A G T C A C G T C T A G A G T C A C G T A C T G A G T C A G T C G C T A A T G C A G T C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTCTGCTGCCACC-
-----CTGCCCGCA
 A T G C A C G T A G T C A C G T C T A G A G T C A C G T A C T G A G T C A G T C G C T A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTCTGCTGCCACC
-----TTGCCAAG
 A T G C A C G T A G T C A C G T C T A G A G T C A C G T A C T G A G T C A G T C G C T A A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTCTGCTGCCACC---
----GCGACCACCGAA
 A T G C A C G T A G T C A C G T C T A G A G T C A C G T A C T G A G T C A G T C G C T A A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

ZBTB7A/MA0750.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTCTGCTGCCACC--
---GGCGACCACCGA
 A T G C A C G T A G T C A C G T C T A G A G T C A C G T A C T G A G T C A G T C G C T A A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A