p-value: | 1e-5 |
log p-value: | -1.362e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.62% |
Number of Background Sequences with motif | 2.4 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 55.0 +/- 10.6bp |
Average Position of motif in Background | 43.2 +/- 12.9bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0123.1_Obox3/Jaspar
Match Rank: | 1 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TAGTGAATCC------ ATAGTTAATCCCCCNNA |
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PH0125.1_Obox5_2/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TAGTGAATCC----- GATAATTAATCCCTCTT |
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PH0122.1_Obox2/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TAGTGAATCC------ ATAGTTAATCCCCCTCA |
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PH0121.1_Obox1/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TAGTGAATCC------ NTAGTTAATCCCCTTAN |
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PH0137.1_Pitx1/Jaspar
Match Rank: | 5 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TAGTGAATCC------ NTTGTTAATCCCTCTNN |
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PH0035.1_Gsc/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TAGTGAATCC----- AATCGTTAATCCCTTTA |
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PH0124.1_Obox5_1/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TAGTGAATCC----- NANANTTAATCCCNNNN |
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PH0138.1_Pitx2/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TAGTGAATCC----- GNNNATTAATCCCTNCN |
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PH0139.1_Pitx3/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TAGTGAATCC---- GNNAGCTAATCCCCCN |
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PH0130.1_Otx2/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TAGTGAATCC----- GANNATTAATCCCTNNN |
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