Information for 5-GGAGGGCTCAAGGCTT (Motif 8)

A C T G A T C G C G T A C T A G C T A G A C T G A T G C A C G T A G T C G T C A C T G A A C T G A C T G A T G C G A C T A C G T
Reverse Opposite:
C G T A C T G A A T C G A G T C A G T C A G C T A C G T A C T G G T C A T A C G G T A C A G T C A G T C C G A T A T G C A G T C
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.822
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.4 +/- 20.0bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGAGGGCTCAAGGCTT
----AGGTCAAGGTCA
A C T G A T C G C G T A C T A G C T A G A C T G A T G C A C G T A G T C G T C A C T G A A C T G A C T G A T G C G A C T A C G T
A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGAGGGCTCAAGGCTT--
---AAGTTCAAGGTCAGC
A C T G A T C G C G T A C T A G C T A G A C T G A T G C A C G T A G T C G T C A C T G A A C T G A C T G A T G C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GGAGGGCTCAAGGCTT
----AGGTCAAGGTCA
A C T G A T C G C G T A C T A G C T A G A C T G A T G C A C G T A G T C G T C A C T G A A C T G A C T G A T G C G A C T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGAGGGCTCAAGGCTT
GGCGAGGGGTCAAGGGC-
A C G T A C G T A C T G A T C G C G T A C T A G C T A G A C T G A T G C A C G T A G T C G T C A C T G A A C T G A C T G A T G C G A C T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GGAGGGCTCAAGGCTT
------NTCAAGGTCA
A C T G A T C G C G T A C T A G C T A G A C T G A T G C A C G T A G T C G T C A C T G A A C T G A C T G A T G C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGAGGGCTCAAGGCTT
NTNNNGGGGTCANGNNN-
A C G T A C G T A C T G A T C G C G T A C T A G C T A G A C T G A T G C A C G T A G T C G T C A C T G A A C T G A C T G A T G C G A C T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GGAGGGCTCAAGGCTT
------BTCAAGGTCA
A C T G A T C G C G T A C T A G C T A G A C T G A T G C A C G T A G T C G T C A C T G A A C T G A C T G A T G C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:GGAGGGCTCAAGGCTT
--------CNAGGCCT
A C T G A T C G C G T A C T A G C T A G A C T G A T G C A C G T A G T C G T C A C T G A A C T G A C T G A T G C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGAGGGCTCAAGGCTT
-CAAAGGTCAAGGG--
A C T G A T C G C G T A C T A G C T A G A C T G A T G C A C G T A G T C G T C A C T G A A C T G A C T G A T G C G A C T A C G T
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGAGGGCTCAAGGCTT
CTCCAGGGGTCAATTGA-
A C G T A C G T A C T G A T C G C G T A C T A G C T A G A C T G A T G C A C G T A G T C G T C A C T G A A C T G A C T G A T G C G A C T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T