Information for 6-GGCTGGGCTCTGT (Motif 12)

A C T G A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T A T G C A C G T A C T G A G C T
Reverse Opposite:
T C G A A G T C G T C A A T C G C G T A A C T G G T A C G T A C A G T C C G T A A C T G A G T C A G T C
p-value:1e-8
log p-value:-2.052e+01
Information Content per bp:1.892
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.6 +/- 20.7bp
Average Position of motif in Background45.6 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGCTGGGCTCTGT--
GYCTGGYYTNTGTCA
 A C T G A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T A T G C A C G T A C T G A G C T A C G T A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGCTGGGCTCTGT
WDNCTGGGCA----
 A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T A T G C A C G T A C T G A G C T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGCTGGGCTCTGT
--CTGACCTTTG-
 A C T G A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T A T G C A C G T A C T G A G C T
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTGGGCTCTGT
NGCTN--------
 A C T G A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T A T G C A C G T A C T G A G C T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGCTGGGCTCTGT
GGGGGCGGGGCC----
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T A T G C A C G T A C T G A G C T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCTGGGCTCTGT
TWGTCTGV-------
 A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T A T G C A C G T A C T G A G C T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGCTGGGCTCTGT
AGGGGGCGGGGCTG---
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T A T G C A C G T A C T G A G C T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCTGGGCTCTGT
GGGGCTYGKCTGGGA
 A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T A T G C A C G T A C T G A G C T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCTGGGCTCTGT
-GCTGTG------
 A C T G A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T A T G C A C G T A C T G A G C T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGCTGGGCTCTGT------
---TGGACTTTGNNCTNTG
 A C T G A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G