Information for 7-AAGCTTATTA (Motif 10)

C T G A C T G A C A T G T A G C G C A T A C G T T G C A G A C T A G C T T C G A
Reverse Opposite:
A G C T T C G A C T G A A C G T T G C A C G T A A T C G G T A C G A C T G A C T
p-value:1e-13
log p-value:-3.077e+01
Information Content per bp:1.652
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif9.10%
Number of Background Sequences with motif1378.8
Percentage of Background Sequences with motif3.46%
Average Position of motif in Targets50.3 +/- 26.9bp
Average Position of motif in Background49.0 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-AAGCTTATTA
CAAGCTT----
 A C G T C T G A C T G A C A T G T A G C G C A T A C G T T G C A G A C T A G C T T C G A
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AAGCTTATTA-
-AGCTCATTAT
 C T G A C T G A C A T G T A G C G C A T A C G T T G C A G A C T A G C T T C G A A C G T
A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AAGCTTATTA-----
NNNACCTCATTATCNTN
 A C G T A C G T C T G A C T G A C A T G T A G C G C A T A C G T T G C A G A C T A G C T T C G A A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AAGCTTATTA-----
GCAACCTCATTATNNNN
 A C G T A C G T C T G A C T G A C A T G T A G C G C A T A C G T T G C A G A C T A G C T T C G A A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0045.1_Hoxa1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAGCTTATTA----
CTGAGCTAATTACCGT
 A C G T A C G T C T G A C T G A C A T G T A G C G C A T A C G T T G C A G A C T A G C T T C G A A C G T A C G T A C G T A C G T
A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

LBX1/MA0618.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AAGCTTATTA-
---CTAATTAA
 C T G A C T G A C A T G T A G C G C A T A C G T T G C A G A C T A G C T T C G A A C G T
A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

PH0094.1_Lhx4/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AAGCTTATTA-----
CAAAGCTAATTAGNTTN
 A C G T A C G T C T G A C T G A C A T G T A G C G C A T A C G T T G C A G A C T A G C T T C G A A C G T A C G T A C G T A C G T A C G T
G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGCTTATTA-
TAATCHGATTAC
 A C G T C T G A C T G A C A T G T A G C G C A T A C G T T G C A G A C T A G C T T C G A A C G T
G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

PHOX2A/MA0713.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGCTTATTA
TAATTTAATTA
 A C G T C T G A C T G A C A T G T A G C G C A T A C G T T G C A G A C T A G C T T C G A
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PH0074.1_Hoxd1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAGCTTATTA-----
NNNAGCTAATTAGCTTA
 A C G T A C G T C T G A C T G A C A T G T A G C G C A T A C G T T G C A G A C T A G C T T C G A A C G T A C G T A C G T A C G T A C G T
C G A T G T C A G T A C T G C A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G C T C G A T A G C T G C T A