Information for 4-TAAAACGCTCAAA (Motif 8)

A C G T G T C A C G T A C G T A C G T A G T A C C T A G A T G C C G A T A T G C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A T C G C G T A A T C G A G T C A C T G A C G T A C G T A C G T A C G T C G T A
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.855
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 31.6bp
Average Position of motif in Background48.2 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TAAAACGCTCAAA
AAGGTCAAAAGGTCAA-
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A G T A C C T A G A T G C C G A T A T G C C G T A C G T A C G T A
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TAAAACGCTCAAA--
---AAAGATCAAAGG
 A C G T G T C A C G T A C G T A C G T A G T A C C T A G A T G C C G A T A T G C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Rarb/MA0857.1/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TAAAACGCTCAAA
AAAGGTCAAAAGGTCA--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A G T A C C T A G A T G C C G A T A T G C C G T A C G T A C G T A
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A A C G T A C G T

RARA/MA0729.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TAAAACGCTCAAA-
GAGGTCAAAAGGTCAATG
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A G T A C C T A G A T G C C G A T A T G C C G T A C G T A C G T A A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TAAAACGCTCAAA-----
---AAAGATCAAAGGGTT
 A C G T G T C A C G T A C G T A C G T A G T A C C T A G A T G C C G A T A T G C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TAAAACGCTCAAA
GAGGTCAAAAGGTCA--
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A G T A C C T A G A T G C C G A T A T G C C G T A C G T A C G T A
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TAAAACGCTCAAA----
---AAAGATCAAAGGAA
 A C G T G T C A C G T A C G T A C G T A G T A C C T A G A T G C C G A T A T G C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TAAAACGCTCAAA
--AGCCACTCAAG
 A C G T G T C A C G T A C G T A C G T A G T A C C T A G A T G C C G A T A T G C C G T A C G T A C G T A
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TAAAACGCTCAAA
NCYAATAAAA--------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A G T A C C T A G A T G C C G A T A T G C C G T A C G T A C G T A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TAAAACGCTCAAA
CCAATAAAAA-------
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A G T A C C T A G A T G C C G A T A T G C C G T A C G T A C G T A
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T