p-value: | 1e-13 |
log p-value: | -3.032e+01 |
Information Content per bp: | 1.718 |
Number of Target Sequences with motif | 29.0 |
Percentage of Target Sequences with motif | 6.65% |
Number of Background Sequences with motif | 524.3 |
Percentage of Background Sequences with motif | 1.14% |
Average Position of motif in Targets | 45.6 +/- 24.3bp |
Average Position of motif in Background | 50.4 +/- 29.5bp |
Strand Bias (log2 ratio + to - strand density) | 1.1 |
Multiplicity (# of sites on avg that occur together) | 1.11 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rarg/MA0859.1/Jaspar
Match Rank: | 1 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGTTTCTGA---- TTGACCTTTTGACCTT |
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CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 2 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAGTTTCTGA CGGTTTCAAA |
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RARA/MA0729.1/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GAGTTTCTGA---- CATTGACCTTTTGACCTC |
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Rarb/MA0857.1/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAGTTTCTGA----- TGACCTTTTGACCTTT |
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PH0077.1_Hoxd12/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGTTTCTGA----- NNNATTTTACGACNNTN |
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RELA/MA0107.1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GAGTTTCTGA GGGAATTTCC-- |
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IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GAGTTTCTGA TGGTTTCAGT |
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HOXC10/MA0905.1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GAGTTTCTGA- -NTTTTACGAC |
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PH0068.1_Hoxc13/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAGTTTCTGA----- NAATTTTACGAGNTNN |
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PH0076.1_Hoxd11/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGTTTCTGA----- ANNATTTTACGACNTNA |
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