Information for 2-WAGGAAACKCCSCCCC (Motif 2)

G C A T G T C A A C T G A C T G C T G A G T C A C G T A A T G C C A G T A G T C A G T C T A G C A G T C G T A C A G T C G T A C
Reverse Opposite:
A C T G T A C G A C T G A C T G A T C G C T A G A C T G G T A C A T C G A C G T A C G T A G C T A G T C G T A C A C G T C G A T
p-value:1e-13
log p-value:-3.045e+01
Information Content per bp:1.754
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.8 +/- 22.1bp
Average Position of motif in Background89.2 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:WAGGAAACKCCSCCCC
--GGAAATTCCC----
 G C A T G T C A A C T G A C T G C T G A G T C A C G T A A T G C C A G T A G T C A G T C T A G C A G T C G T A C A G T C G T A C
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:WAGGAAACKCCSCCCC
--GGAAANCCCC----
 G C A T G T C A A C T G A C T G C T G A G T C A C G T A A T G C C A G T A G T C A G T C T A G C A G T C G T A C A G T C G T A C
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:WAGGAAACKCCSCCCC
--GGAAATCCCC----
 G C A T G T C A A C T G A C T G C T G A G T C A C G T A A T G C C A G T A G T C A G T C T A G C A G T C G T A C A G T C G T A C
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:WAGGAAACKCCSCCCC
--GGAAATTCCC----
 G C A T G T C A A C T G A C T G C T G A G T C A C G T A A T G C C A G T A G T C A G T C T A G C A G T C G T A C A G T C G T A C
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:WAGGAAACKCCSCCCC
--GGACACACCCCC--
 G C A T G T C A A C T G A C T G C T G A G T C A C G T A A T G C C A G T A G T C A G T C T A G C A G T C G T A C A G T C G T A C
A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-WAGGAAACKCCSCCCC
NNTGGAAANN-------
 A C G T G C A T G T C A A C T G A C T G C T G A G T C A C G T A A T G C C A G T A G T C A G T C T A G C A G T C G T A C A G T C G T A C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-WAGGAAACKCCSCCCC
AATGGAAAAT-------
 A C G T G C A T G T C A A C T G A C T G C T G A G T C A C G T A A T G C C A G T A G T C A G T C T A G C A G T C G T A C A G T C G T A C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:WAGGAAACKCCSCCCC
--GGGAAATCCCCN--
 G C A T G T C A A C T G A C T G C T G A G T C A C G T A A T G C C A G T A G T C A G T C T A G C A G T C G T A C A G T C G T A C
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--WAGGAAACKCCSCCCC
NDCAGGAARTNN------
 A C G T A C G T G C A T G T C A A C T G A C T G C T G A G T C A C G T A A T G C C A G T A G T C A G T C T A G C A G T C G T A C A G T C G T A C
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:WAGGAAACKCCSCCCC--
----NAGCCCCGCCCCCN
 G C A T G T C A A C T G A C T G C T G A G T C A C G T A A T G C C A G T A G T C A G T C T A G C A G T C G T A C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T