Information for 1-TCAAAAACAGAGAGAG (Motif 1)

A C G T A T G C C G T A C T G A C G T A C T G A C G T A A G T C C T G A C T A G C T G A C T A G C G T A A C T G C G T A C T A G
Reverse Opposite:
A G T C C G A T G T A C C G A T G A T C A G C T A G T C A G C T C T A G G A C T A G C T A C G T A G C T G C A T T A C G G T C A
p-value:1e-15
log p-value:-3.460e+01
Information Content per bp:1.745
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 26.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCAAAAACAGAGAGAG
ATGCTAAAAATAGAA----
 A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A C T G A C G T A A G T C C T G A C T A G C T G A C T A G C G T A A C T G C G T A C T A G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCAAAAACAGAGAGAG
DCYAAAAATAGM-----
 A C G T A C G T A T G C C G T A C T G A C G T A C T G A C G T A A G T C C T G A C T A G C T G A C T A G C G T A A C T G C G T A C T A G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TCAAAAACAGAGAGAG
AAAGATCAAAGGAA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A C T G A C G T A A G T C C T G A C T A G C T G A C T A G C G T A A C T G C G T A C T A G
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCAAAAACAGAGAGAG
ACATCAAAGGNA-------
 A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A C T G A C G T A A G T C C T G A C T A G C T G A C T A G C G T A A C T G C G T A C T A G
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCAAAAACAGAGAGAG
KCCAAAAATAGC-----
 A C G T A C G T A T G C C G T A C T G A C G T A C T G A C G T A A G T C C T G A C T A G C T G A C T A G C G T A A C T G C G T A C T A G
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TCAAAAACAGAGAGAG
ACATCAAAGG---------
 A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A C T G A C G T A A G T C C T G A C T A G C T G A C T A G C G T A A C T G C G T A C T A G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TCAAAAACAGAGAGAG
TGCCAAAATAAACANN-
 A C G T A C G T A T G C C G T A C T G A C G T A C T G A C G T A A G T C C T G A C T A G C T G A C T A G C G T A A C T G C G T A C T A G
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------TCAAAAACAGAGAGAG
TATAGATCAAAGGAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A C T G A C G T A A G T C C T G A C T A G C T G A C T A G C G T A A C T G C G T A C T A G
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TCAAAAACAGAGAGAG
GCTAAAAATAGC-----
 A C G T A C G T A T G C C G T A C T G A C G T A C T G A C G T A A G T C C T G A C T A G C T G A C T A G C G T A A C T G C G T A C T A G
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TCAAAAACAGAGAGAG
---AAAACAAAGG---
 A C G T A T G C C G T A C T G A C G T A C T G A C G T A A G T C C T G A C T A G C T G A C T A G C G T A A C T G C G T A C T A G
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T