Information for 4-GTCGCTGACAGSMCCC (Motif 8)

C T A G G C A T G T A C C T A G A G T C G A C T A T C G G T C A T A G C G C T A T A C G A T G C T G C A A T G C G A T C G T A C
Reverse Opposite:
C A T G C T A G A T C G A C G T A T C G A G T C C A G T A T C G C A G T A T G C C T G A C T A G A G T C C A T G C G T A G A T C
p-value:1e-12
log p-value:-2.907e+01
Information Content per bp:1.670
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif59.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets47.1 +/- 26.2bp
Average Position of motif in Background50.3 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTCGCTGACAGSMCCC
-TGAGTGACAGSC---
 C T A G G C A T G T A C C T A G A G T C G A C T A T C G G T C A T A G C G C T A T A C G A T G C T G C A A T G C G A T C G T A C
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTCGCTGACAGSMCCC
GGTGYTGACAGS----
 C T A G G C A T G T A C C T A G A G T C G A C T A T C G G T C A T A G C G C T A T A C G A T G C T G C A A T G C G A T C G T A C
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTCGCTGACAGSMCCC
----TTGACAGC----
 C T A G G C A T G T A C C T A G A G T C G A C T A T C G G T C A T A G C G C T A T A C G A T G C T G C A A T G C G A T C G T A C
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTCGCTGACAGSMCCC
---VBTGWCAGCB---
 C T A G G C A T G T A C C T A G A G T C G A C T A T C G G T C A T A G C G C T A T A C G A T G C T G C A A T G C G A T C G T A C
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GTCGCTGACAGSMCCC
------CACAGN----
 C T A G G C A T G T A C C T A G A G T C G A C T A T C G G T C A T A G C G C T A T A C G A T G C T G C A A T G C G A T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTCGCTGACAGSMCCC
----TTGACAG-----
 C T A G G C A T G T A C C T A G A G T C G A C T A T C G G T C A T A G C G C T A T A C G A T G C T G C A A T G C G A T C G T A C
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTCGCTGACAGSMCCC
NTGATTGACAGN----
 C T A G G C A T G T A C C T A G A G T C G A C T A T C G G T C A T A G C G C T A T A C G A T G C T G C A A T G C G A T C G T A C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GTCGCTGACAGSMCCC
---RHTGWCAR-----
 C T A G G C A T G T A C C T A G A G T C G A C T A T C G G T C A T A G C G C T A T A C G A T G C T G C A A T G C G A T C G T A C
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTCGCTGACAGSMCCC-
-NNATTGACAGGTGCTT
 C T A G G C A T G T A C C T A G A G T C G A C T A T C G G T C A T A G C G C T A T A C G A T G C T G C A A T G C G A T C G T A C A C G T
A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GTCGCTGACAGSMCCC
----TTGACAGG----
 C T A G G C A T G T A C C T A G A G T C G A C T A T C G G T C A T A G C G C T A T A C G A T G C T G C A A T G C G A T C G T A C
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T