Information for 7-GCGGCCACTA (Motif 7)

A C T G A G T C A C T G A C T G G T A C G T A C G T C A A T G C C G A T C T G A
Reverse Opposite:
A G C T C G T A T A C G A C G T A C T G A C T G A G T C T A G C T A C G A G T C
p-value:1e-13
log p-value:-3.021e+01
Information Content per bp:1.841
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif65.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets58.7 +/- 19.5bp
Average Position of motif in Background45.1 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCGGCCACTA---
-RGGGCACTAACY
 A C T G A G T C A C T G A C T G G T A C G T A C G T C A A T G C C G A T C T G A A C G T A C G T A C G T
A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

ZBTB7A/MA0750.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGGCCACTA-
GGCGACCACCGA
 A C G T A C T G A G T C A C T G A C T G G T A C G T A C G T C A A T G C C G A T C T G A A C G T
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCGGCCACTA--
GCGACCACACTG
 A C T G A G T C A C T G A C T G G T A C G T A C G T C A A T G C C G A T C T G A A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCGGCCACTA------
NTCNTCCCCTATNNGNN
 A C G T A C T G A G T C A C T G A C T G G T A C G T A C G T C A A T G C C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCGGCCACTA--
--GGCCATTAAC
 A C T G A G T C A C T G A C T G G T A C G T A C G T C A A T G C C G A T C T G A A C G T A C G T
A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

HINFP/MA0131.2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCGGCCACTA
NCGCGGACGTTG
 A C G T A C G T A C T G A G T C A C T G A C T G G T A C G T A C G T C A A T G C C G A T C T G A
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGGCCACTA
GTCCGCCATTA
 A C G T A C T G A G T C A C T G A C T G G T A C G T A C G T C A A T G C C G A T C T G A
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCGGCCACTA---
-AGGTCTCTAACC
 A C T G A G T C A C T G A C T G G T A C G T A C G T C A A T G C C G A T C T G A A C G T A C G T A C G T
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCGGCCACTA-
---BCMATTAG
 A C T G A G T C A C T G A C T G G T A C G T A C G T C A A T G C C G A T C T G A A C G T
A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

PH0073.1_Hoxc9/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCGGCCACTA-----
GGAGGTCATTAATTAT
 A C G T A C T G A G T C A C T G A C T G G T A C G T A C G T C A A T G C C G A T C T G A A C G T A C G T A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T