Information for 13-GAGGGAGGCGGGA (Motif 18)

T C A G G T C A C A T G A C T G T C A G T G C A C T A G A T C G G T A C C A T G C A T G A T C G G T C A
Reverse Opposite:
C A G T A T G C G A T C G T A C C A T G A T G C A G T C A C G T A G T C A G T C G A T C C A G T A G T C
p-value:1e-9
log p-value:-2.135e+01
Information Content per bp:1.750
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif132.9
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets55.2 +/- 22.1bp
Average Position of motif in Background51.8 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGAGGCGGGA-
GGGNGGGGGCGGGGC
 A C G T T C A G G T C A C A T G A C T G T C A G T G C A C T A G A T C G G T A C C A T G C A T G A T C G G T C A A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.71
Offset:5
Orientation:forward strand
Alignment:GAGGGAGGCGGGA---
-----GGGCGGGAAGG
 T C A G G T C A C A T G A C T G T C A G T G C A C T A G A T C G G T A C C A T G C A T G A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGAGGCGGGA--
NNNAAGGGGGCGGGNNN
 A C G T A C G T T C A G G T C A C A T G A C T G T C A G T G C A C T A G A T C G G T A C C A T G C A T G A T C G G T C A A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GAGGGAGGCGGGA-
---GGGGGCGGGGC
 T C A G G T C A C A T G A C T G T C A G T G C A C T A G A T C G G T A C C A T G C A T G A T C G G T C A A C G T
A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.70
Offset:6
Orientation:forward strand
Alignment:GAGGGAGGCGGGA---
------GGCGGGAARN
 T C A G G T C A C A T G A C T G T C A G T G C A C T A G A T C G G T A C C A T G C A T G A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GAGGGAGGCGGGA--
---BTKGGCGGGAAA
 T C A G G T C A C A T G A C T G T C A G T G C A C T A G A T C G G T A C C A T G C A T G A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.69
Offset:-8
Orientation:forward strand
Alignment:--------GAGGGAGGCGGGA
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T C A C A T G A C T G T C A G T G C A C T A G A T C G G T A C C A T G C A T G A T C G G T C A
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GAGGGAGGCGGGA-
----CWGGCGGGAA
 T C A G G T C A C A T G A C T G T C A G T G C A C T A G A T C G G T A C C A T G C A T G A T C G G T C A A C G T
A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.69
Offset:5
Orientation:forward strand
Alignment:GAGGGAGGCGGGA---
-----GGGCGGGAAGG
 T C A G G T C A C A T G A C T G T C A G T G C A C T A G A T C G G T A C C A T G C A T G A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GAGGGAGGCGGGA----
NAGANTGGCGGGGNGNA
 T C A G G T C A C A T G A C T G T C A G T G C A C T A G A T C G G T A C C A T G C A T G A T C G G T C A A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A