Information for 1-TGGCCACNAGGGGGCG (Motif 1)

A G C T C A T G C T A G T A G C A G T C C T G A A T G C G C A T T C G A A C T G C T A G C A T G A C T G A C T G G T A C T C A G
Reverse Opposite:
A G T C C A T G A G T C G T A C G T A C A G T C A G T C A G C T C G T A A T C G G A C T A C T G A C T G G A T C G A T C T C G A
p-value:1e-206
log p-value:-4.750e+02
Information Content per bp:1.625
Number of Target Sequences with motif190.0
Percentage of Target Sequences with motif20.21%
Number of Background Sequences with motif331.3
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets51.4 +/- 19.7bp
Average Position of motif in Background49.5 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:TGGCCACNAGGGGGCG---
TGGCCACCAGGGGGCGCTA
 A G C T C A T G C T A G T A G C A G T C C T G A A T G C G C A T T C G A A C T G C T A G C A T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:TGGCCACNAGGGGGCG------
--GCCASCAGGGGGCGCYVNNG
 A G C T C A T G C T A G T A G C A G T C C T G A A T G C G C A T T C G A A C T G C T A G C A T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:TGGCCACNAGGGGGCG----
TGGCCACCAGGTGGCACTNT
 A G C T C A T G C T A G T A G C A G T C C T G A A T G C G C A T T C G A A C T G C T A G C A T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:TGGCCACNAGGGGGCG-----
----NNNAAGGGGGCGGGNNN
 A G C T C A T G C T A G T A G C A G T C C T G A A T G C G C A T T C G A A C T G C T A G C A T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGGCCACNAGGGGGCG
-CACCCCCGGGGGGG-
 A G C T C A T G C T A G T A G C A G T C C T G A A T G C G C A T T C G A A C T G C T A G C A T G A C T G A C T G G T A C T C A G
A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGGCCACNAGGGGGCG--
----ANTGCGGGGGCGGN
 A G C T C A T G C T A G T A G C A G T C C T G A A T G C G C A T T C G A A C T G C T A G C A T G A C T G A C T G G T A C T C A G A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TGGCCACNAGGGGGCG-----
-------AAGGGGGCGTGGCC
 A G C T C A T G C T A G T A G C A G T C C T G A A T G C G C A T T C G A A C T G C T A G C A T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGGCCACNAGGGGGCG
-NCNCAGCGGGGGGTC
 A G C T C A T G C T A G T A G C A G T C C T G A A T G C G C A T T C G A A C T G C T A G C A T G A C T G A C T G G T A C T C A G
A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:8
Orientation:forward strand
Alignment:TGGCCACNAGGGGGCG----
--------RGKGGGCGKGGC
 A G C T C A T G C T A G T A G C A G T C C T G A A T G C G C A T T C G A A C T G C T A G C A T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGCCACNAGGGGGCG
-DCHCAGCAGGRGGCC
 A G C T C A T G C T A G T A G C A G T C C T G A A T G C G C A T T C G A A C T G C T A G C A T G A C T G A C T G G T A C T C A G
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C