Information for 18-GGTTGCTGCTCCG (Motif 30)

A C T G A C T G C G A T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A G T C A T C G
Reverse Opposite:
T A G C A C T G A C T G C G T A A C T G A G T C C T G A C T A G A G T C C G T A C G T A A G T C A G T C
p-value:1e-6
log p-value:-1.483e+01
Information Content per bp:1.931
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets34.8 +/- 16.1bp
Average Position of motif in Background59.7 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.68
Offset:7
Orientation:forward strand
Alignment:GGTTGCTGCTCCG
-------GCTCCG
 A C T G A C T G C G A T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A G T C A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGTTGCTGCTCCG
---CNGTCCTCCC
 A C T G A C T G C G A T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A G T C A T C G
A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTTGCTGCTCCG--
AGATGCTRCTRCCHT
 A C T G A C T G C G A T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGTTGCTGCTCCG
---TKCTGTTCCA
 A C T G A C T G C G A T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A G T C A T C G
A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GGTTGCTGCTCCG
NCCGTTGCTANGNGN
 A C G T A C G T A C T G A C T G C G A T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A G T C A T C G
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGTTGCTGCTCCG
CGTGGGTGGTCC-
 A C T G A C T G C G A T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A G T C A T C G
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GGTTGCTGCTCCG
------NGCTN--
 A C T G A C T G C G A T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A G T C A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GGTTGCTGCTCCG--
AGTTTCGGTTTCGTT
 A C T G A C T G C G A T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T
C T G A A T C G C G A T C G A T A C G T G A T C C T A G A T C G C A G T C G A T A C G T G A T C C T A G C G A T C G A T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GGTTGCTGCTCCG
AGCAGCTGCT---
 A C T G A C T G C G A T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A G T C A T C G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGCTGCTCCG
TGGGTGTGGC----
 A C G T A C T G A C T G C G A T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A G T C A T C G
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T