Information for 11-CGCAGACGGTTCC (Motif 20)

G T A C A C T G A G T C C G T A C T A G G T C A G T A C C T A G A T C G A G C T A G C T A G T C A G T C
Reverse Opposite:
A C T G A C T G T C G A C T G A T A G C G A T C A C T G A C G T A G T C C G A T A C T G A G T C A C T G
p-value:1e-9
log p-value:-2.204e+01
Information Content per bp:1.793
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif19.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.0 +/- 29.8bp
Average Position of motif in Background59.0 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGCAGACGGTTCC-
--CAGCTGTTTCCT
 G T A C A C T G A G T C C G T A C T A G G T C A G T A C C T A G A T C G A G C T A G C T A G T C A G T C A C G T
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGCAGACGGTTCC
-CCAGACRSVB--
 G T A C A C T G A G T C C G T A C T A G G T C A G T A C C T A G A T C G A G C T A G C T A G T C A G T C
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGCAGACGGTTCC
-CCAGACAG----
 G T A C A C T G A G T C C G T A C T A G G T C A G T A C C T A G A T C G A G C T A G C T A G T C A G T C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGCAGACGGTTCC-
----TKCTGTTCCA
 G T A C A C T G A G T C C G T A C T A G G T C A G T A C C T A G A T C G A G C T A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CGCAGACGGTTCC---
------NRYTTCCGGH
 G T A C A C T G A G T C C G T A C T A G G T C A G T A C C T A G A T C G A G C T A G C T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T

NRF1/MA0506.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGCAGACGGTTCC
TGCGCAGGCGC----
 A C G T A C G T G T A C A C T G A G T C C G T A C T A G G T C A G T A C C T A G A T C G A G C T A G C T A G T C A G T C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGCAGACGGTTCC
-BCAGACWA----
 G T A C A C T G A G T C C G T A C T A G G T C A G T A C C T A G A T C G A G C T A G C T A G T C A G T C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CGCAGACGGTTCC-----
------CACTTCCYCTTT
 G T A C A C T G A G T C C G T A C T A G G T C A G T A C C T A G A T C G A G C T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGACGGTTCC-
GVACAGNMTGTYCTB
 A C G T G T A C A C T G A G T C C G T A C T A G G T C A G T A C C T A G A T C G A G C T A G C T A G T C A G T C A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CGCAGACGGTTCC---
------HACTTCCGGY
 G T A C A C T G A G T C C G T A C T A G G T C A G T A C C T A G A T C G A G C T A G C T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C G A A G T C C G A T C G A T A G T C A T G C A C T G A T C G G A C T