Information for 3-GTCATTGTTT (Motif 7)

C A T G A C G T A G T C C G T A A C G T A C G T A C T G C G A T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A A G T C C G T A T C G A A C G T C T A G C G T A G A T C
p-value:1e-9
log p-value:-2.141e+01
Information Content per bp:1.858
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets38.4 +/- 25.2bp
Average Position of motif in Background42.1 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:forward strand
Alignment:GTCATTGTTT
---ATTGTTA
 C A T G A C G T A G T C C G T A A C G T A C G T A C T G C G A T A G C T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GTCATTGTTT
NCCATTGTTY
 C A T G A C G T A G T C C G T A A C G T A C G T A C T G C G A T A G C T A C G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GTCATTGTTT-
-CCATTGTTYB
 C A T G A C G T A G T C C G T A A C G T A C G T A C T G C G A T A G C T A C G T A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:GTCATTGTTT--
---ATTGTTTAN
 C A T G A C G T A G T C C G T A A C G T A C G T A C T G C G A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GTCATTGTTT-
-CCATTGTTTT
 C A T G A C G T A G T C C G T A A C G T A C G T A C T G C G A T A G C T A C G T A C G T
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GTCATTGTTT
-CCATTGTTC
 C A T G A C G T A G T C C G T A A C G T A C G T A C T G C G A T A G C T A C G T
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.74
Offset:3
Orientation:forward strand
Alignment:GTCATTGTTT
---ATTGTT-
 C A T G A C G T A G T C C G T A A C G T A C G T A C T G C G A T A G C T A C G T
A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GTCATTGTTT-----
-TAATTGTTCTAAAC
 C A T G A C G T A G T C C G T A A C G T A C G T A C T G C G A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GTCATTGTTT---
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T C A T G A C G T A G T C C G T A A C G T A C G T A C T G C G A T A G C T A C G T A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GTCATTGTTT-----
CNNNTATTGTTCNNNNN
 A C G T A C G T C A T G A C G T A G T C C G T A A C G T A C G T A C T G C G A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A