Information for 4-CCAGCCCCAGGCG (Motif 6)

A T G C A T G C T C G A A T C G T A G C A G T C T A G C A T G C C G T A A T C G T A C G A T G C T A C G
Reverse Opposite:
A T G C T A C G A T G C A T G C G C A T T A C G A T C G T C A G A T C G T A G C A G C T T A C G T A C G
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.729
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif4.70%
Number of Background Sequences with motif750.0
Percentage of Background Sequences with motif1.57%
Average Position of motif in Targets52.4 +/- 25.9bp
Average Position of motif in Background50.0 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CCAGCCCCAGGCG
--AGCCTCAGGCA
 A T G C A T G C T C G A A T C G T A G C A G T C T A G C A T G C C G T A A T C G T A C G A T G C T A C G
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CCAGCCCCAGGCG
--CGCCTCAGGCA
 A T G C A T G C T C G A A T C G T A G C A G T C T A G C A T G C C G T A A T C G T A C G A T G C T A C G
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CCAGCCCCAGGCG
--AGCCTCAGGCA
 A T G C A T G C T C G A A T C G T A G C A G T C T A G C A T G C C G T A A T C G T A C G A T G C T A C G
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCAGCCCCAGGCG--
NTNGCCTCAGGCNNN
 A T G C A T G C T C G A A T C G T A G C A G T C T A G C A T G C C G T A A T C G T A C G A T G C T A C G A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCAGCCCCAGGCG--
-CAGGCCNNGGCCNN
 A T G C A T G C T C G A A T C G T A G C A G T C T A G C A T G C C G T A A T C G T A C G A T G C T A C G A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCAGCCCCAGGCG--
---SCCTSAGGSCAW
 A T G C A T G C T C G A A T C G T A G C A G T C T A G C A T G C C G T A A T C G T A C G A T G C T A C G A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCAGCCCCAGGCG--
---GCCTCAGGGCAT
 A T G C A T G C T C G A A T C G T A G C A G T C T A G C A T G C C G T A A T C G T A C G A T G C T A C G A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCAGCCCCAGGCG-
--GTCCCCAGGGGA
 A T G C A T G C T C G A A T C G T A G C A G T C T A G C A T G C C G T A A T C G T A C G A T G C T A C G A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCAGCCCCAGGCG--
ATTGCCTGAGGCGAA
 A T G C A T G C T C G A A T C G T A G C A G T C T A G C A T G C C G T A A T C G T A C G A T G C T A C G A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCAGCCCCAGGCG--
ATTGCCTCAGGCAAT
 A T G C A T G C T C G A A T C G T A G C A G T C T A G C A T G C C G T A A T C G T A C G A T G C T A C G A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T