Information for 8-MGGCTTTSTGCCM (Motif 20)

G T A C A C T G A C T G A G T C A C G T A C G T A C G T A T G C A C G T A C T G G A T C A T G C G T A C
Reverse Opposite:
A C T G A T C G C A T G A G T C C G T A T A C G C G T A C G T A G T C A A C T G A G T C A G T C C A T G
p-value:1e-5
log p-value:-1.354e+01
Information Content per bp:1.886
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.3 +/- 26.5bp
Average Position of motif in Background72.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-MGGCTTTSTGCCM
TTGGCATGGTGCCA
 A C G T G T A C A C T G A C T G A G T C A C G T A C G T A C G T A T G C A C G T A C T G G A T C A T G C G T A C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--MGGCTTTSTGCCM-
CTTGGCANNNTGCCAA
 A C G T A C G T G T A C A C T G A C T G A G T C A C G T A C G T A C G T A T G C A C G T A C T G G A T C A T G C G T A C A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-MGGCTTTSTGCCM
CTGGCAGNCTGCCA
 A C G T G T A C A C T G A C T G A G T C A C G T A C G T A C G T A T G C A C G T A C T G G A T C A T G C G T A C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:MGGCTTTSTGCCM
--YCTTTGTTCC-
 G T A C A C T G A C T G A G T C A C G T A C G T A C G T A T G C A C G T A C T G G A T C A T G C G T A C
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:MGGCTTTSTGCCM
--CCWTTGTYYB-
 G T A C A C T G A C T G A G T C A C G T A C G T A C G T A T G C A C G T A C T G G A T C A T G C G T A C
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:MGGCTTTSTGCCM
---CTTTGT----
 G T A C A C T G A C T G A G T C A C G T A C G T A C G T A T G C A C G T A C T G G A T C A T G C G T A C
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:MGGCTTTSTGCCM
--CCTTTGTTTT-
 G T A C A C T G A C T G A G T C A C G T A C G T A C G T A T G C A C G T A C T G G A T C A T G C G T A C
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.58
Offset:7
Orientation:forward strand
Alignment:MGGCTTTSTGCCM---
-------ATGCCCACC
 G T A C A C T G A C T G A G T C A C G T A C G T A C G T A T G C A C G T A C T G G A T C A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---MGGCTTTSTGCCM
AGGVNCCTTTGT----
 A C G T A C G T A C G T G T A C A C T G A C T G A G T C A C G T A C G T A C G T A T G C A C G T A C T G G A T C A T G C G T A C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.56
Offset:7
Orientation:forward strand
Alignment:MGGCTTTSTGCCM---
-------CTGCCCGCA
 G T A C A C T G A C T G A G T C A C G T A C G T A C G T A T G C A C G T A C T G G A T C A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A