Information for 12-TGCGGTTGACCTA (Motif 8)

A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G G T C A A G T C A G T C A G C T C G T A
Reverse Opposite:
C G A T C T G A A C T G A C T G A C G T G T A C G T C A C G T A A G T C A G T C A C T G A G T C C G T A
p-value:1e-10
log p-value:-2.433e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 19.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGCGGTTGACCTA
TTGCGGTTT-----
 A C G T A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G G T C A A G T C A G T C A G C T C G T A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGCGGTTGACCTA
TTTGCGGTTT-----
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G G T C A A G T C A G T C A G C T C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGCGGTTGACCTA--
--CNNTTGACCTTTG
 A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G G T C A A G T C A G T C A G C T C G T A A C G T A C G T
A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCGGTTGACCTA
TGACCTTGACCT-
 A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G G T C A A G T C A G T C A G C T C G T A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TGCGGTTGACCTA
------TGACCT-
 A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G G T C A A G T C A G T C A G C T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TGCGGTTGACCTA------
-----TTGACCTANTTATN
 A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G G T C A A G T C A G T C A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TGCGGTTGACCTA---
------TGACCTTGAT
 A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G G T C A A G T C A G T C A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TGCGGTTGACCTA-
------TGACCTYA
 A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G G T C A A G T C A G T C A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:TGCGGTTGACCTA---
------TGACCTARTT
 A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G G T C A A G T C A G T C A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCGGTTGACCTA
TGACCTTGACCT-
 A C G T A C T G A G T C A C T G A C T G A C G T A C G T A C T G G T C A A G T C A G T C A G C T C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T