Information for 3-TTTCGCTCGGTTG (Motif 9)

A G C T A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G C T A C G T A C T G
Reverse Opposite:
A G T C C G T A C T G A A G T C A G T C A C T G C G T A A C T G G T A C A C T G C G T A C G T A C T G A
p-value:1e-10
log p-value:-2.424e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.4 +/- 23.2bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTTCGCTCGGTTG
TTTTCGCGCGAA--
 A C G T A G C T A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G C T A C G T A C T G
G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTTCGCTCGGTTG-----
GTCACGCTTGGCTGCNCNN
 A C G T A G C T A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTCGCTCGGTTG
VDTTTCCCGCCA---
 A C G T A C G T A G C T A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G C T A C G T A C T G
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTTCGCTCGGTTG
DTTTCCCGCC----
 A C G T A G C T A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G C T A C G T A C T G
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTTCGCTCGGTTG
HTTTCCCASG----
 A C G T A G C T A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G C T A C G T A C T G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTTCGCTCGGTTG-
ACCACTCTCGGTCAC
 A C G T A G C T A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G C T A C G T A C T G A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTTCGCTCGGTTG
NYTTCCCGCC----
 A C G T A G C T A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G C T A C G T A C T G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTTCGCTCGGTTG------
RTTKCADNNKRTTGCATNAN
 A C G T A G C T A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TTTCGCTCGGTTG
NNTTCCCGCCC---
 A C G T A G C T A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G C T A C G T A C T G
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TTTCGCTCGGTTG-
NGTCACGCTTGGCTGC
 A C G T A C G T A G C T A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G C T A C G T A C T G A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C