Information for 8-GGGCAAAAAT (Motif 19)

A T C G A C T G A C T G A G T C C G T A T C G A C G T A C G T A T C G A A C G T
Reverse Opposite:
G T C A A C G T C G A T A C G T A C G T C G A T C T A G T G A C A G T C A T G C
p-value:1e-6
log p-value:-1.494e+01
Information Content per bp:1.803
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif42.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets40.4 +/- 24.4bp
Average Position of motif in Background45.2 +/- 38.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.89
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGGCAAAAAT--
CAATTGCAAAAATAT
 A C G T A C G T A C G T A T C G A C T G A C T G A G T C C G T A T C G A C G T A C G T A T C G A A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGGCAAAAAT---
-GCTAAAAATAGC
 A T C G A C T G A C T G A G T C C G T A T C G A C G T A C G T A T C G A A C G T A C G T A C G T A C G T
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAAAAAT
TNNGGGCAG----
 A C G T A C G T A C G T A T C G A C T G A C T G A G T C C G T A T C G A C G T A C G T A T C G A A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAAAAT----
ATGCTAAAAATAGAA
 A C G T A T C G A C T G A C T G A G T C C G T A T C G A C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGCAAAAAT---
-DCYAAAAATAGM
 A T C G A C T G A C T G A G T C C G T A T C G A C G T A C G T A T C G A A C G T A C G T A C G T A C G T
A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGCAAAAAT--
GGCCATAAATCA
 A T C G A C T G A C T G A G T C C G T A T C G A C G T A C G T A T C G A A C G T A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGGCAAAAAT-
TACTGGAAAAAAAA
 A C G T A C G T A C G T A T C G A C T G A C T G A G T C C G T A T C G A C G T A C G T A T C G A A C G T A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAAAAAT
NGTGGGCAT----
 A C G T A C G T A C G T A T C G A C T G A C T G A G T C C G T A T C G A C G T A C G T A T C G A A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GGGCAAAAAT
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G A G T C C G T A T C G A C G T A C G T A T C G A A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGGCAAAAAT---
GGCCATAAATCAC
 A T C G A C T G A C T G A G T C C G T A T C G A C G T A C G T A T C G A A C G T A C G T A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C