Information for 6-GAGCAGCGAGCTC (Motif 13)

A C T G C G T A A C T G A G T C C T G A A C T G A T G C A C T G C G T A C T A G A G T C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C A C G T A G T C A T C G A G T C A G C T A C T G A G T C A C G T A G T C
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.3 +/- 13.9bp
Average Position of motif in Background48.6 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGCAGCGAGCTC
GGGAGGACNG-----
 A C G T A C G T A C T G C G T A A C T G A G T C C T G A A C T G A T G C A C T G C G T A C T A G A G T C C G A T A G T C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GAGCAGCGAGCTC
CAGCC--------
 A C T G C G T A A C T G A G T C C T G A A C T G A T G C A C T G C G T A C T A G A G T C C G A T A G T C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GAGCAGCGAGCTC
CGGAGC---------
 A C G T A C G T A C T G C G T A A C T G A G T C C T G A A C T G A T G C A C T G C G T A C T A G A G T C C G A T A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:4
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GAGCAGCGAGCTC----
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T A C T G C G T A A C T G A G T C C T G A A C T G A T G C A C T G C G T A C T A G A G T C C G A T A G T C A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GAGCAGCGAGCTC------
--NNNNTGAGCACTGTNNG
 A C T G C G T A A C T G A G T C C T G A A C T G A T G C A C T G C G T A C T A G A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GAGCAGCGAGCTC
CACAGCAGGGGG---
 A C G T A C G T A C T G C G T A A C T G A G T C C T G A A C T G A T G C A C T G C G T A C T A G A G T C C G A T A G T C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----GAGCAGCGAGCTC
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C C T G A A C T G A T G C A C T G C G T A C T A G A G T C C G A T A G T C
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GAGCAGCGAGCTC
DCTCAGCAGG---
 A C T G C G T A A C T G A G T C C T G A A C T G A T G C A C T G C G T A C T A G A G T C C G A T A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GAGCAGCGAGCTC-
GAGTTCATTGAGTTCA
 A C G T A C G T A C T G C G T A A C T G A G T C C T G A A C T G A T G C A C T G C G T A C T A G A G T C C G A T A G T C A C G T
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

RXRA::VDR/MA0074.1/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-GAGCAGCGAGCTC-
GGGTCAACGAGTTCA
 A C G T A C T G C G T A A C T G A G T C C T G A A C T G A T G C A C T G C G T A C T A G A G T C C G A T A G T C A C G T
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A