Information for 4-CCGCCGGGGA (Motif 11)

T A G C G T A C T C A G T G A C A T G C A T C G C A T G A C T G T A C G C G T A
Reverse Opposite:
G C A T A T G C T G A C G T A C A T G C T A C G A C T G A G T C C A T G A T C G
p-value:1e-9
log p-value:-2.250e+01
Information Content per bp:1.591
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif4.68%
Number of Background Sequences with motif727.1
Percentage of Background Sequences with motif1.55%
Average Position of motif in Targets44.4 +/- 28.4bp
Average Position of motif in Background50.8 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F4/MA0470.1/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCGGGGA
NNTTCCCGCCC----
 A C G T A C G T A C G T A C G T A C G T T A G C G T A C T C A G T G A C A T G C A T C G C A T G A C T G T A C G C G T A
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCGGGGA
DTTTCCCGCC-----
 A C G T A C G T A C G T A C G T A C G T T A G C G T A C T C A G T G A C A T G C A T C G C A T G A C T G T A C G C G T A
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCGGGGA-
TCCCCTGGGGAC
 A C G T T A G C G T A C T C A G T G A C A T G C A T C G C A T G A C T G T A C G C G T A A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCGGGGA
TTCCCGCCWG---
 A C G T A C G T A C G T T A G C G T A C T C A G T G A C A T G C A T C G C A T G A C T G T A C G C G T A
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCGGGGA--
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T T A G C G T A C T C A G T G A C A T G C A T C G C A T G A C T G T A C G C G T A A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCGCCGGGGA--
AAATTCCCCCCGGAAGT
 A C G T A C G T A C G T A C G T A C G T T A G C G T A C T C A G T G A C A T G C A T C G C A T G A C T G T A C G C G T A A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCGGGGA--
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T T A G C G T A C T C A G T G A C A T G C A T C G C A T G A C T G T A C G C G T A A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCGCCGGGGA
AGCGCGCC-----
 A C G T A C G T A C G T T A G C G T A C T C A G T G A C A T G C A T C G C A T G A C T G T A C G C G T A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCGGGGA
TTTCCCGCCMAV--
 A C G T A C G T A C G T A C G T T A G C G T A C T C A G T G A C A T G C A T C G C A T G A C T G T A C G C G T A
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCGCCGGGGA-
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A C G T T A G C G T A C T C A G T G A C A T G C A T C G C A T G A C T G T A C G C G T A A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A