Information for 5-CYYKGRCCRCCCGGMC (Motif 10)

A T G C G A T C A G T C C A G T A C T G T C A G A G T C A T G C C T A G A G T C A G T C A G T C A C T G A C T G G T A C A T G C
Reverse Opposite:
A T C G A C T G A G T C A G T C A C T G A C T G A C T G A G T C A T C G A C T G A G T C A G T C G T C A C T A G C T A G A T C G
p-value:1e-10
log p-value:-2.331e+01
Information Content per bp:1.840
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 27.2bp
Average Position of motif in Background53.8 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CYYKGRCCRCCCGGMC
---GGACCACCCACG-
 A T G C G A T C A G T C C A G T A C T G T C A G A G T C A T G C C T A G A G T C A G T C A G T C A C T G A C T G G T A C A T G C
A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CYYKGRCCRCCCGGMC--
--ATCCCCGCCCCTAAAA
 A T G C G A T C A G T C C A G T A C T G T C A G A G T C A T G C C T A G A G T C A G T C A G T C A C T G A C T G G T A C A T G C A C G T A C G T
A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CYYKGRCCRCCCGGMC
TGCCTGCGYCMCCTT---
 A C G T A C G T A T G C G A T C A G T C C A G T A C T G T C A G A G T C A T G C C T A G A G T C A G T C A G T C A C T G A C T G G T A C A T G C
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CYYKGRCCRCCCGGMC
TATCGACCCCCCACAG
 A T G C G A T C A G T C C A G T A C T G T C A G A G T C A T G C C T A G A G T C A G T C A G T C A C T G A C T G G T A C A T G C
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CYYKGRCCRCCCGGMC
CATAAGACCACCATTAC
 A C G T A T G C G A T C A G T C C A G T A C T G T C A G A G T C A T G C C T A G A G T C A G T C A G T C A C T G A C T G G T A C A T G C
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CYYKGRCCRCCCGGMC
------CTGCCCGCA-
 A T G C G A T C A G T C C A G T A C T G T C A G A G T C A T G C C T A G A G T C A G T C A G T C A C T G A C T G G T A C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CYYKGRCCRCCCGGMC---
----GACCCCCCGCTGTGC
 A T G C G A T C A G T C C A G T A C T G T C A G A G T C A T G C C T A G A G T C A G T C A G T C A C T G A C T G G T A C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CYYKGRCCRCCCGGMC
--GCGACCACACTG--
 A T G C G A T C A G T C C A G T A C T G T C A G A G T C A T G C C T A G A G T C A G T C A G T C A C T G A C T G G T A C A T G C
A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CYYKGRCCRCCCGGMC--
-TCACCCCGCCCCAAATT
 A T G C G A T C A G T C C A G T A C T G T C A G A G T C A T G C C T A G A G T C A G T C A G T C A C T G A C T G G T A C A T G C A C G T A C G T
A C G T A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CYYKGRCCRCCCGGMC
NNNGGGGCGCCCCCNN
 A T G C G A T C A G T C C A G T A C T G T C A G A G T C A T G C C T A G A G T C A G T C A G T C A C T G A C T G G T A C A T G C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A