Information for 9-TCACTCCACGCTGACC (Motif 20)

C G A T A T G C C G T A A G T C C G A T A G T C A T G C C G T A A G T C A T C G A G T C A C G T A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A A C T G A T G C C T A G A C G T A T C G A C T G C G T A A C T G A C G T A T C G C G T A
p-value:1e-5
log p-value:-1.359e+01
Information Content per bp:1.912
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.3 +/- 23.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCACTCCACGCTGACC
CNGTCACGCCAC-------
 A C G T A C G T A C G T C G A T A T G C C G T A A G T C C G A T A G T C A T G C C G T A A G T C A T C G A G T C A C G T A C T G C G T A A G T C A G T C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCACTCCACGCTGACC
ATCACCCCAT-------
 A C G T C G A T A T G C C G T A A G T C C G A T A G T C A T G C C G T A A G T C A T C G A G T C A C G T A C T G C G T A A G T C A G T C
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCACTCCACGCTGACC
ATCACCCCAC-------
 A C G T C G A T A T G C C G T A A G T C C G A T A G T C A T G C C G T A A G T C A T C G A G T C A C G T A C T G C G T A A G T C A G T C
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCACTCCACGCTGACC-
BTGACCTCTNNHTGACCY
 A C G T C G A T A T G C C G T A A G T C C G A T A G T C A T G C C G T A A G T C A T C G A G T C A C G T A C T G C G T A A G T C A G T C A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCACTCCACGCTGACC-
TGACCTCTCNNTGACCT
 C G A T A T G C C G T A A G T C C G A T A G T C A T G C C G T A A G T C A T C G A G T C A C G T A C T G C G T A A G T C A G T C A C G T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCACTCCACGCTGACC
ATCACCCCAT-------
 A C G T C G A T A T G C C G T A A G T C C G A T A G T C A T G C C G T A A G T C A T C G A G T C A C G T A C T G C G T A A G T C A G T C
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.57
Offset:11
Orientation:reverse strand
Alignment:TCACTCCACGCTGACC-
-----------TGACCT
 C G A T A T G C C G T A A G T C C G A T A G T C A T G C C G T A A G T C A T C G A G T C A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

ESR2/MA0258.2/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCACTCCACGCTGACC-
--AGGNCANNGTGACCT
 C G A T A T G C C G T A A G T C C G A T A G T C A T G C C G T A A G T C A T C G A G T C A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.55
Offset:11
Orientation:reverse strand
Alignment:TCACTCCACGCTGACC---
-----------TGACCYCT
 C G A T A T G C C G T A A G T C C G A T A G T C A T G C C G T A A G T C A T C G A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCACTCCACGCTGACC
-NAGGTCACNNTGACC
 C G A T A T G C C G T A A G T C C G A T A G T C A T G C C G T A A G T C A T C G A G T C A C G T A C T G C G T A A G T C A G T C
A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C