Information for 4-TGGAGCTTGA (Motif 17)

C A G T A C T G A C T G C T G A A T C G A G T C A C G T A C G T C T A G G T C A
Reverse Opposite:
C A G T A G T C G T C A C G T A A C T G A T G C A G C T A G T C A G T C G T C A
p-value:1e-8
log p-value:-1.862e+01
Information Content per bp:1.856
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif50.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets47.7 +/- 25.6bp
Average Position of motif in Background51.9 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGGAGCTTGA
CGGAGC----
 C A G T A C T G A C T G C T G A A T C G A G T C A C G T A C G T C T A G G T C A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGCTTGA
NATGACCTTGA
 A C G T C A G T A C T G A C T G C T G A A T C G A G T C A C G T A C G T C T A G G T C A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGGAGCTTGA
--AAGCTTG-
 C A G T A C T G A C T G C T G A A T C G A G T C A C G T A C G T C T A G G T C A
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGGAGCTTGA-
-TGACCTTGAN
 C A G T A C T G A C T G C T G A A T C G A G T C A C G T A C G T C T A G G T C A A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGGAGCTTGA-
-TGACCTTGAV
 C A G T A C T G A C T G C T G A A T C G A G T C A C G T A C G T C T A G G T C A A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGGAGCTTGA---
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T C A G T A C T G A C T G C T G A A T C G A G T C A C G T A C G T C T A G G T C A A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGGAGCTTGA
GRTGMTRGAGCC---
 A C G T A C G T A C G T A C G T A C G T C A G T A C T G A C T G C T G A A T C G A G T C A C G T A C G T C T A G G T C A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGGAGCTTGA
ATGACCTTGA
 C A G T A C T G A C T G C T G A A T C G A G T C A C G T A C G T C T A G G T C A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Esrra/MA0592.2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGGAGCTTGA-
ATGACCTTGAA
 C A G T A C T G A C T G C T G A A T C G A G T C A C G T A C G T C T A G G T C A A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGCTTGA----
ATTGGACTTTGACCCC
 A C G T A C G T C A G T A C T G A C T G C T G A A T C G A G T C A C G T A C G T C T A G G T C A A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C