Information for 1-CTCTTGCCGAGGCGGC (Motif 1)

A G T C A C G T A G T C A G C T A C G T A T C G A T G C A G T C A C T G C G T A A C T G A C T G G A T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C A T G A G T C A G T C G A C T A G T C A C T G A T C G A T G C C G T A C T G A A C T G G T C A A C T G
p-value:1e-13
log p-value:-3.018e+01
Information Content per bp:1.868
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.3 +/- 24.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0110.1_Bcl6b_2/Jaspar

Match Rank:1
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTCTTGCCGAGGCGGC---
---NNTNAGGGGCGGNNNN
 A G T C A C G T A G T C A G C T A C G T A T C G A T G C A G T C A C T G C G T A A C T G A C T G G A T C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

PB0010.1_Egr1_1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCTTGCCGAGGCGGC
--ANTGCGGGGGCGGN
 A G T C A C G T A G T C A G C T A C G T A T C G A T G C A G T C A C T G C G T A A C T G A C T G G A T C A C T G A C T G A G T C
A C G T A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTCTTGCCGAGGCGGC-
----TGCCCTGAGGGCA
 A G T C A C G T A G T C A G C T A C G T A T C G A T G C A G T C A C T G C G T A A C T G A C T G G A T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTCTTGCCGAGGCGGC-
----TGCCCTGAGGGCA
 A G T C A C G T A G T C A G C T A C G T A T C G A T G C A G T C A C T G C G T A A C T G A C T G G A T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTCTTGCCGAGGCGGC-
---TTGCCATGGCAACN
 A G T C A C G T A G T C A G C T A C G T A T C G A T G C A G T C A C T G C G T A A C T G A C T G G A T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTCTTGCCGAGGCGGC-
----TGCCCTNAGGGCA
 A G T C A C G T A G T C A G C T A C G T A T C G A T G C A G T C A C T G C G T A A C T G A C T G G A T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTGCCGAGGCGGC
CCCCCTGCTGTG-----
 A C G T A G T C A C G T A G T C A G C T A C G T A T C G A T G C A G T C A C T G C G T A A C T G A C T G G A T C A C T G A C T G A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTCTTGCCGAGGCGGC--
----GGCGGGGGCGGGGG
 A G T C A C G T A G T C A G C T A C G T A T C G A T G C A G T C A C T G C G T A A C T G A C T G G A T C A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTCTTGCCGAGGCGGC
CGGTTGCCATGGCAAC
 A G T C A C G T A G T C A G C T A C G T A T C G A T G C A G T C A C T G C G T A A C T G A C T G G A T C A C T G A C T G A G T C
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

Rfx1/MA0509.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTCTTGCCGAGGCGGC
--GTTGCCATGGNAAC
 A G T C A C G T A G T C A G C T A C G T A T C G A T G C A G T C A C T G C G T A A C T G A C T G G A T C A C T G A C T G A G T C
A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C