Information for 2-GYAGAAGGTMWGCCTG (Motif 6)

A C T G A G C T C T G A A C T G C G T A C G T A C T A G A C T G G A C T T G C A G C T A A C T G A T G C A G T C C G A T C T A G
Reverse Opposite:
A G T C C G T A A C T G A T C G A G T C C G A T A C G T C G T A G T A C G A T C A C G T A C G T A G T C A G C T T C G A A G T C
p-value:1e-10
log p-value:-2.479e+01
Information Content per bp:1.772
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 28.3bp
Average Position of motif in Background38.7 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GYAGAAGGTMWGCCTG-----
------GGNGCGNCTGTTNNN
 A C T G A G C T C T G A A C T G C G T A C G T A C T A G A C T G G A C T T G C A G C T A A C T G A T G C A G T C C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GYAGAAGGTMWGCCTG
--NGAAGC--------
 A C T G A G C T C T G A A C T G C G T A C G T A C T A G A C T G G A C T T G C A G C T A A C T G A T G C A G T C C G A T C T A G
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:3
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GYAGAAGGTMWGCCTG
NTGGAATGTN------
 A C T G A G C T C T G A A C T G C G T A C G T A C T A G A C T G G A C T T G C A G C T A A C T G A T G C A G T C C G A T C T A G
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.48
Offset:12
Orientation:forward strand
Alignment:GYAGAAGGTMWGCCTG--
------------GCTGTG
 A C T G A G C T C T G A A C T G C G T A C G T A C T A G A C T G G A C T T G C A G C T A A C T G A T G C A G T C C G A T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

TEAD1/MA0090.2/Jaspar

Match Rank:5
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GYAGAAGGTMWGCCTG
NTGGAATGTG------
 A C T G A G C T C T G A A C T G C G T A C G T A C T A G A C T G G A C T T G C A G C T A A C T G A T G C A G T C C G A T C T A G
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-GYAGAAGGTMWGCCTG
AGAGGAA----------
 A C G T A C T G A G C T C T G A A C T G C G T A C G T A C T A G A C T G G A C T T G C A G C T A A C T G A T G C A G T C C G A T C T A G
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.47
Offset:9
Orientation:forward strand
Alignment:GYAGAAGGTMWGCCTG-
---------TWGTCTGV
 A C T G A G C T C T G A A C T G C G T A C G T A C T A G A C T G G A C T T G C A G C T A A C T G A T G C A G T C C G A T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.46
Offset:4
Orientation:forward strand
Alignment:GYAGAAGGTMWGCCTG---
----NAGGTCACNNTGACC
 A C T G A G C T C T G A A C T G C G T A C G T A C T A G A C T G G A C T T G C A G C T A A C T G A T G C A G T C C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--GYAGAAGGTMWGCCTG
AAGTTCAAGGTCAGC---
 A C G T A C G T A C T G A G C T C T G A A C T G C G T A C G T A C T A G A C T G G A C T T G C A G C T A A C T G A T G C A G T C C G A T C T A G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.46
Offset:5
Orientation:forward strand
Alignment:GYAGAAGGTMWGCCTG----
-----AGGTCACCCTGACCT
 A C T G A G C T C T G A A C T G C G T A C G T A C T A G A C T G G A C T T G C A G C T A A C T G A T G C A G T C C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T