p-value: | 1e-8 |
log p-value: | -1.844e+01 |
Information Content per bp: | 1.745 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.15% |
Number of Background Sequences with motif | 31.7 |
Percentage of Background Sequences with motif | 0.09% |
Average Position of motif in Targets | 38.5 +/- 24.0bp |
Average Position of motif in Background | 60.3 +/- 27.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | AAKRCRSCAGCCA- ------BCAGACWA |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | AAKRCRSCAGCCA- ------CCAGACAG |
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GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AAKRCRSCAGCCA-- ---GGACCACCCACG |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAKRCRSCAGCCA----- -CAAATCCAGACATCACA |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AAKRCRSCAGCCA- -AGGTGNCAGACAG |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | AAKRCRSCAGCCA-------- ------SCAGYCADGCATGAC |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | AAKRCRSCAGCCA--- ------CCAGACRSVB |
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PH0141.1_Pknox2/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAKRCRSCAGCCA---- -AAGCACCTGTCAATAT |
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NFIC/MA0161.1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | AAKRCRSCAGCCA- --------TGCCAA |
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NFIX/MA0671.1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | AAKRCRSCAGCCA-- ------CGTGCCAAG |
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