Information for 4-TCACGGCTTTTGTGGC (Motif 11)

G A C T A G T C T C G A A G T C A C T G A T C G A G T C A G C T A C G T A G C T A G C T A C T G C G A T A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C C G T A A G T C C T G A C T G A C G T A C T G A A C T G A T G C A G T C C T A G A C G T A C T G C T G A
p-value:1e-10
log p-value:-2.329e+01
Information Content per bp:1.883
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 25.7bp
Average Position of motif in Background40.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TCACGGCTTTTGTGGC--
-------GTCTGTGGTTT
 G A C T A G T C T C G A A G T C A C T G A T C G A G T C A G C T A C G T A G C T A G C T A C T G C G A T A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TCACGGCTTTTGTGGC---
-------NNHTGTGGTTWN
 G A C T A G T C T C G A A G T C A C T G A T C G A G T C A G C T A C G T A G C T A G C T A C T G C G A T A C T G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TCACGGCTTTTGTGGC--
-------TTTTATGGCTN
 G A C T A G T C T C G A A G T C A C T G A T C G A G T C A G C T A C G T A G C T A G C T A C T G C G A T A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TCACGGCTTTTGTGGC
------CCWTTGTY--
 G A C T A G T C T C G A A G T C A C T G A T C G A G T C A G C T A C G T A G C T A G C T A C T G C G A T A C T G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCACGGCTTTTGTGGC---
---NGANTTTTATGGCTCN
 G A C T A G T C T C G A A G T C A C T G A T C G A G T C A G C T A C G T A G C T A G C T A C T G C G A T A C T G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TCACGGCTTTTGTGGC
NNGGCCACGCCTTTN-----
 A C G T A C G T A C G T A C G T G A C T A G T C T C G A A G T C A C T G A T C G A G T C A G C T A C G T A G C T A G C T A C T G C G A T A C T G A C T G A T G C
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCACGGCTTTTGTGGC
GTCACGCTCNCTGA---
 A C G T G A C T A G T C T C G A A G T C A C T G A T C G A G T C A G C T A C G T A G C T A G C T A C T G C G A T A C T G A C T G A T G C
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TCACGGCTTTTGTGGC
------CCTTTGTT--
 G A C T A G T C T C G A A G T C A C T G A T C G A G T C A G C T A C G T A G C T A G C T A C T G C G A T A C T G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TCACGGCTTTTGTGGC
------CCTTTGTTTT
 G A C T A G T C T C G A A G T C A C T G A T C G A G T C A G C T A C G T A G C T A G C T A C T G C G A T A C T G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TCACGGCTTTTGTGGC--
--------NNTGTGGTTT
 G A C T A G T C T C G A A G T C A C T G A T C G A G T C A G C T A C G T A G C T A G C T A C T G C G A T A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T