Information for 3-GGCTTTKTGAAGG (Motif 4)

A C T G A C T G A G T C A G C T A C G T A C G T C A T G A C G T C T A G C G T A C T G A A T C G C T A G
Reverse Opposite:
G A T C A T G C A G C T C G A T A G T C T C G A G T A C G T C A T G C A C T G A A C T G A G T C T G A C
p-value:1e-14
log p-value:-3.362e+01
Information Content per bp:1.838
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.0 +/- 21.3bp
Average Position of motif in Background37.2 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGCTTTKTGAAGG
--CTTTGT-----
 A C T G A C T G A G T C A G C T A C G T A C G T C A T G A C G T C T A G C G T A C T G A A T C G C T A G
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGCTTTKTGAAGG
AGGVNCCTTTGT-----
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G C T A C G T A C G T C A T G A C G T C T A G C G T A C T G A A T C G C T A G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGCTTTKTGAAGG
-CCWTTGTYYB--
 A C T G A C T G A G T C A G C T A C G T A C G T C A T G A C G T C T A G C G T A C T G A A T C G C T A G
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCTTTKTGAAGG
DGWTTTATGRCN-
 A C T G A C T G A G T C A G C T A C G T A C G T C A T G A C G T C T A G C G T A C T G A A T C G C T A G
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCTTTKTGAAGG
-CCWTTGTY----
 A C T G A C T G A G T C A G C T A C G T A C G T C A T G A C G T C T A G C G T A C T G A A T C G C T A G
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCTTTKTGAAGG
GNCTATAAAAGG-
 A C T G A C T G A G T C A G C T A C G T A C G T C A T G A C G T C T A G C G T A C T G A A T C G C T A G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTTKTGAAGG-
ANTCCTTTGTCTNNNN
 A C G T A C G T A C T G A C T G A G T C A G C T A C G T A C G T C A T G A C G T C T A G C G T A C T G A A T C G C T A G A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCTTTKTGAAGG
NGCTN--------
 A C T G A C T G A G T C A G C T A C G T A C G T C A T G A C G T C T A G C G T A C T G A A T C G C T A G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGCTTTKTGAAGG
--TTTTATKRGG-
 A C T G A C T G A G T C A G C T A C G T A C G T C A T G A C G T C T A G C G T A C T G A A T C G C T A G
A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGCTTTKTGAAGG
-GCTATTTTTGGM
 A C T G A C T G A G T C A G C T A C G T A C G T C A T G A C G T C T A G C G T A C T G A A T C G C T A G
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C