Information for 7-TGAAAAAGGCAAT (Motif 11)

C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T
Reverse Opposite:
G T C A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T C G A T A C G T A T G C C G T A
p-value:1e-11
log p-value:-2.616e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 27.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGAAAAAGGCAAT
---AAAAGTCAA-
 C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGAAAAAGGCAAT-
GAAAAAATTGCAAGG
 A C G T C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TGAAAAAGGCAAT---
-----AAGGCAAGTGT
 C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ONECUT3/MA0757.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGAAAAAGGCAAT---
--AAAAAATCAATAAT
 C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGAAAAAGGCAAT
-RACAAWGG----
 C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGAAAAAGGCAAT
-AACAAAGG----
 C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGAAAAAGGCAAT--
-GAGAACCGAAACTG
 C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGAAAAAGGCAAT
---NACAGGAAAT
 C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

RARA/MA0729.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGAAAAAGGCAAT-
GAGGTCAAAAGGTCAATG
 A C G T A C G T A C G T A C G T C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGAAAAAGGCAAT-
--AAAGRGGAAGTG
 C G A T A T C G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G