Information for 1-CGACCACGTG (Motif 1)

A T G C A C T G G C T A T A G C G T A C C T G A A G T C C A T G G A C T A C T G
Reverse Opposite:
T G A C C T G A G T A C T C A G G A C T C A T G A T C G C G A T T G A C T A C G
p-value:1e-25
log p-value:-5.919e+01
Information Content per bp:1.606
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif17.22%
Number of Background Sequences with motif2447.9
Percentage of Background Sequences with motif5.41%
Average Position of motif in Targets53.9 +/- 26.6bp
Average Position of motif in Background49.6 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.91
Offset:2
Orientation:forward strand
Alignment:CGACCACGTG
--NCCACGTG
 A T G C A C T G G C T A T A G C G T A C C T G A A G T C C A T G G A C T A C T G
A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.90
Offset:1
Orientation:forward strand
Alignment:CGACCACGTG-
-NNCCACGTGG
 A T G C A C T G G C T A T A G C G T A C C T G A A G T C C A T G G A C T A C T G A C G T
A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G

Mycn/MA0104.3/Jaspar

Match Rank:3
Score:0.90
Offset:2
Orientation:forward strand
Alignment:CGACCACGTG
--GCCACGTG
 A T G C A C T G G C T A T A G C G T A C C T G A A G T C C A T G G A C T A C T G
A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.90
Offset:1
Orientation:forward strand
Alignment:CGACCACGTG-
-NNCCACGTGG
 A T G C A C T G G C T A T A G C G T A C C T G A A G T C C A T G G A C T A C T G A C G T
A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G

MAX/MA0058.3/Jaspar

Match Rank:5
Score:0.89
Offset:2
Orientation:forward strand
Alignment:CGACCACGTG--
--ACCACGTGCT
 A T G C A C T G G C T A T A G C G T A C C T G A A G T C C A T G G A C T A C T G A C G T A C G T
A C G T A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

MNT/MA0825.1/Jaspar

Match Rank:6
Score:0.89
Offset:2
Orientation:forward strand
Alignment:CGACCACGTG--
--ACCACGTGCC
 A T G C A C T G G C T A T A G C G T A C C T G A A G T C C A T G G A C T A C T G A C G T A C G T
A C G T A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

PB0043.1_Max_1/Jaspar

Match Rank:7
Score:0.89
Offset:0
Orientation:forward strand
Alignment:CGACCACGTG------
TGACCACGTGGTCGGG
 A T G C A C T G G C T A T A G C G T A C C T G A A G T C C A T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C A T G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T A T G C T C A G C A T G C A T G

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:CGACCACGTG--
NNACCACGTGGT
 A T G C A C T G G C T A T A G C G T A C C T G A A G T C C A T G G A C T A C T G A C G T A C G T
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.88
Offset:2
Orientation:forward strand
Alignment:CGACCACGTG
--NVCACGTG
 A T G C A C T G G C T A T A G C G T A C C T G A A G T C C A T G G A C T A C T G
A C G T A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G

Npas2/MA0626.1/Jaspar

Match Rank:10
Score:0.87
Offset:2
Orientation:forward strand
Alignment:CGACCACGTG--
--GGCACGTGTC
 A T G C A C T G G C T A T A G C G T A C C T G A A G T C C A T G G A C T A C T G A C G T A C G T
A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C