Information for 3-CGASGTTGGCTGT (Motif 6)

A G T C A T C G G T C A A T C G A T C G A G C T A C G T A C T G A T C G A T G C A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A T C G A T G C G T A C G T C A C T G A A T G C A T C G A C G T A T G C T C A G
p-value:1e-14
log p-value:-3.261e+01
Information Content per bp:1.766
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.7 +/- 23.5bp
Average Position of motif in Background14.9 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:8
Orientation:forward strand
Alignment:CGASGTTGGCTGT-
--------GCTGTG
 A G T C A T C G G T C A A T C G A T C G A G C T A C G T A C T G A T C G A T G C A C G T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CGASGTTGGCTGT
-----TWGTCTGV
 A G T C A T C G G T C A A T C G A T C G A G C T A C G T A C T G A T C G A T G C A C G T A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CGASGTTGGCTGT
-------NGCTN-
 A G T C A T C G G T C A A T C G A T C G A G C T A C G T A C T G A T C G A T G C A C G T A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGASGTTGGCTGT
-----TTGGCA--
 A G T C A T C G G T C A A T C G A T C G A G C T A C G T A C T G A T C G A T G C A C G T A C T G A G C T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CGASGTTGGCTGT
----NTTGGCANN
 A G T C A T C G G T C A A T C G A T C G A G C T A C G T A C T G A T C G A T G C A C G T A C T G A G C T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGASGTTGGCTGT-------
---AGGACGCTGTAAAGGGA
 A G T C A T C G G T C A A T C G A T C G A G C T A C G T A C T G A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:CGASGTTGGCTGT---
--------GCTGTCAA
 A G T C A T C G G T C A A T C G A T C G A G C T A C G T A C T G A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CGASGTTGGCTGT---
------TGGGTGTGGC
 A G T C A T C G G T C A A T C G A T C G A G C T A C G T A C T G A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CGASGTTGGCTGT----
-----NTGGGTGTGGCC
 A G T C A T C G G T C A A T C G A T C G A G C T A C G T A C T G A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Rhox11/MA0629.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CGASGTTGGCTGT-------
---AAGACGCTGTAAAGCGA
 A G T C A T C G G T C A A T C G A T C G A G C T A C G T A C T G A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A