Information for 24-ACGCCTTCATCTA (Motif 39)

C G T A G A T C T A C G A G T C A G T C A G C T A C G T G A T C C G T A C A G T G T A C G A C T C G T A
Reverse Opposite:
C G A T C G T A C A T G G C T A C G A T C A T G G T C A C T G A T C A G A C T G A G T C C T A G G C A T
p-value:1e-6
log p-value:-1.549e+01
Information Content per bp:1.670
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif12.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets37.4 +/- 25.0bp
Average Position of motif in Background47.7 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------ACGCCTTCATCTA
NNGGCCACGCCTTTN----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A T C T A C G A G T C A G T C A G C T A C G T G A T C C G T A C A G T G T A C G A C T C G T A
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACGCCTTCATCTA
CAAGACGCCTTA-----
 A C G T A C G T A C G T A C G T C G T A G A T C T A C G A G T C A G T C A G C T A C G T G A T C C G T A C A G T G T A C G A C T C G T A
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACGCCTTCATCTA
---GCTTCC----
 C G T A G A T C T A C G A G T C A G T C A G C T A C G T G A T C C G T A C A G T G T A C G A C T C G T A
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACGCCTTCATCTA
GTCCGCCATTA----
 A C G T A C G T C G T A G A T C T A C G A G T C A G T C A G C T A C G T G A T C C G T A C A G T G T A C G A C T C G T A
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----ACGCCTTCATCTA
NTCGCGCGCCTTNNN---
 A C G T A C G T A C G T A C G T A C G T C G T A G A T C T A C G A G T C A G T C A G C T A C G T G A T C C G T A C A G T G T A C G A C T C G T A
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACGCCTTCATCTA
TGACCTTGACCT-
 C G T A G A T C T A C G A G T C A G T C A G C T A C G T G A T C C G T A C A G T G T A C G A C T C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----ACGCCTTCATCTA
ANCGCGCGCCCTTNN---
 A C G T A C G T A C G T A C G T A C G T C G T A G A T C T A C G A G T C A G T C A G C T A C G T G A T C C G T A C A G T G T A C G A C T C G T A
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACGCCTTCATCTA--
GACCACATTCATACAAT
 A C G T A C G T C G T A G A T C T A C G A G T C A G T C A G C T A C G T G A T C C G T A C A G T G T A C G A C T C G T A A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACGCCTTCATCTA-
AACCCTTTGATCTTT
 A C G T C G T A G A T C T A C G A G T C A G T C A G C T A C G T G A T C C G T A C A G T G T A C G A C T C G T A A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACGCCTTCATCTA
TCACACCT-------
 A C G T A C G T C G T A G A T C T A C G A G T C A G T C A G C T A C G T G A T C C G T A C A G T G T A C G A C T C G T A
G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T