Information for 2-TAATCCTACA (Motif 3)

G A C T G C T A C G T A C G A T A G T C G T A C C G A T T C G A T G A C G C T A
Reverse Opposite:
C G A T A C T G A G C T C G T A C A T G C T A G C G T A A C G T C G A T C G T A
p-value:1e-14
log p-value:-3.341e+01
Information Content per bp:1.725
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets70.7 +/- 18.5bp
Average Position of motif in Background65.8 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX2/MA0712.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-TAATCCTACA
TTAATCCT---
 A C G T G A C T G C T A C G T A C G A T A G T C G T A C C G A T T C G A T G A C G C T A
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TAATCCTACA
TTAATCCC---
 A C G T G A C T G C T A C G T A C G A T A G T C G T A C C G A T T C G A T G A C G C T A
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TAATCCTACA
NYTAATCCYB--
 A C G T A C G T G A C T G C T A C G T A C G A T A G T C G T A C C G A T T C G A T G A C G C T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TAATCCTACA
YTAATCCY---
 A C G T G A C T G C T A C G T A C G A T A G T C G T A C C G A T T C G A T G A C G C T A
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TAATCCTACA
GCTAATCC----
 A C G T A C G T G A C T G C T A C G T A C G A T A G T C G T A C C G A T T C G A T G A C G C T A
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TAATCCTACA
TAATCCCN--
 G A C T G C T A C G T A C G A T A G T C G T A C C G A T T C G A T G A C G C T A
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--TAATCCTACA
CTTAATCCC---
 A C G T A C G T G A C T G C T A C G T A C G A T A G T C G T A C C G A T T C G A T G A C G C T A
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TAATCCTACA
TTAATCCG---
 A C G T G A C T G C T A C G T A C G A T A G T C G T A C C G A T T C G A T G A C G C T A
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TAATCCTACA
CCTAATCCGC--
 A C G T A C G T G A C T G C T A C G T A C G A T A G T C G T A C C G A T T C G A T G A C G C T A
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TAATCCTACA
GCTAATCCCC--
 A C G T A C G T G A C T G C T A C G T A C G A T A G T C G T A C C G A T T C G A T G A C G C T A
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T