Information for 16-GGGAATTTCC (Motif 29)

C T A G C A T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G T C
Reverse Opposite:
T A C G A C T G C G T A G T C A T G C A C G A T A C G T G T A C G T A C A G T C
p-value:1e-9
log p-value:-2.086e+01
Information Content per bp:1.840
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif16.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets47.9 +/- 31.1bp
Average Position of motif in Background48.0 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:GGGAATTTCC
GGGAATTTCC
 C T A G C A T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GGGAATTTCC
GGGAATTTCC
 C T A G C A T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.88
Offset:0
Orientation:forward strand
Alignment:GGGAATTTCC
GGGGATTTCC
 C T A G C A T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GGGAATTTCC-
NGGGGATTTCCC
 A C G T C T A G C A T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GGGAATTTCC
GGGGATTTCC
 C T A G C A T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGGAATTTCC---
---ATTTTCCATT
 C T A G C A T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GGGAATTTCC---
---ATTTTCCATT
 C T A G C A T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGAATTTCC--
AGGGGATTCCCCT
 A C G T C T A G C A T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGGAATTTCC--
GGGGATTCCCCC
 C T A G C A T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GGGAATTTCC----
----ATTTCCTGTN
 C T A G C A T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G