Information for 10-GCGTCGAGTT (Motif 22)

A C T G A G T C A C T G A C G T A T G C A T C G C T G A A C T G A C G T A C G T
Reverse Opposite:
T C G A G T C A A G T C A G C T A T G C A T C G C G T A G T A C A C T G A G T C
p-value:1e-11
log p-value:-2.633e+01
Information Content per bp:1.861
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.5 +/- 20.9bp
Average Position of motif in Background26.5 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCGTCGAGTT----
TCCGTCGCTTAAAAG
 A C G T A C T G A G T C A C T G A C G T A T G C A T C G C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCGTCGAGTT
TGCGTG-----
 A C G T A C T G A G T C A C T G A C G T A T G C A T C G C T G A A C T G A C G T A C G T
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCGTCGAGTT--
--BTBRAGTGSN
 A C T G A G T C A C T G A C G T A T G C A T C G C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCGTCGAGTT-
--NTCAAGTGG
 A C T G A G T C A C T G A C G T A T G C A T C G C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCGTCGAGTT--
--CTYRAGTGSY
 A C T G A G T C A C T G A C G T A T G C A T C G C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCGTCGAGTT
--GTGGAT--
 A C T G A G T C A C T G A C G T A T G C A T C G C T G A A C T G A C G T A C G T
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------GCGTCGAGTT
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A T G C A T C G C T G A A C T G A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCGTCGAGTT
GCTTCC----
 A C T G A G T C A C T G A C G T A T G C A T C G C T G A A C T G A C G T A C G T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCGTCGAGTT--
GKMTCADRTTWC
 A C T G A G T C A C T G A C G T A T G C A T C G C T G A A C T G A C G T A C G T A C G T A C G T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------GCGTCGAGTT
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A T G C A T C G C T G A A C T G A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G