Information for 10-NGCACGCTGTGCT (Motif 19)

C G A T A C T G A G T C C G T A A T G C A T C G G T A C C A G T A C T G A C G T A T C G A G T C A C G T
Reverse Opposite:
C G T A C T A G A T G C C G T A T G A C G C T A C A T G A T G C A T C G A C G T A C T G A G T C G C A T
p-value:1e-11
log p-value:-2.647e+01
Information Content per bp:1.781
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets36.9 +/- 23.7bp
Average Position of motif in Background64.4 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-NGCACGCTGTGCT-
NNTCCTGCTGTGNNN
 A C G T C G A T A C T G A G T C C G T A A T G C A T C G G T A C C A G T A C T G A C G T A T C G A G T C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:NGCACGCTGTGCT
--CACGCA-----
 C G A T A C T G A G T C C G T A A T G C A T C G G T A C C A G T A C T G A C G T A T C G A G T C A C G T
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:NGCACGCTGTGCT
-GCACGTNC----
 C G A T A C T G A G T C C G T A A T G C A T C G G T A C C A G T A C T G A C G T A T C G A G T C A C G T
A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:NGCACGCTGTGCT
-GCACGTAY----
 C G A T A C T G A G T C C G T A A T G C A T C G G T A C C A G T A C T G A C G T A T C G A G T C A C G T
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-NGCACGCTGTGCT
TBGCACGCAA----
 A C G T C G A T A C T G A G T C C G T A A T G C A T C G G T A C C A G T A C T G A C G T A T C G A G T C A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:NGCACGCTGTGCT
GGCACGCGTC---
 C G A T A C T G A G T C C G T A A T G C A T C G G T A C C A G T A C T G A C G T A T C G A G T C A C G T
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--NGCACGCTGTGCT-
AGNACAGNCTGTTCTN
 A C G T A C G T C G A T A C T G A G T C C G T A A T G C A T C G G T A C C A G T A C T G A C G T A T C G A G T C A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-NGCACGCTGTGCT-
GVACAGNMTGTYCTB
 A C G T C G A T A C T G A G T C C G T A A T G C A T C G G T A C C A G T A C T G A C G T A T C G A G T C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-NGCACGCTGTGCT-
GRACAGWMTGTYCTB
 A C G T C G A T A C T G A G T C C G T A A T G C A T C G G T A C C A G T A C T G A C G T A T C G A G T C A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:NGCACGCTGTGCT
--CCTGCTGAGH-
 C G A T A C T G A G T C C G T A A T G C A T C G G T A C C A G T A C T G A C G T A T C G A G T C A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T