Information for 6-GCTCCGGATT (Motif 13)

A T C G A G T C A C G T A G T C G T A C A C T G A C T G C G T A A C G T A C G T
Reverse Opposite:
T C G A C G T A G C A T A G T C A G T C A C T G T A C G C G T A A C T G A T G C
p-value:1e-12
log p-value:-2.837e+01
Information Content per bp:1.857
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets44.6 +/- 28.0bp
Average Position of motif in Background48.3 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GCTCCGGATT
GCTCCG----
 A T C G A G T C A C G T A G T C G T A C A C T G A C T G C G T A A C G T A C G T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCTCCGGATT---
GTACATCCGGATTTTT
 A C G T A C G T A C G T A T C G A G T C A C G T A G T C G T A C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

TFCP2/MA0145.3/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTCCGGATT
AAACCGGTTT
 A T C G A G T C A C G T A G T C G T A C A C T G A C T G C G T A A C G T A C G T
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

SPDEF/MA0686.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCTCCGGATT
TACATCCGGGT-
 A C G T A C G T A T C G A G T C A C G T A G T C G T A C A C T G A C T G C G T A A C G T A C G T
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTCCGGATT------
TGAACCGGATTAATGAA
 A C G T A T C G A G T C A C G T A G T C G T A C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTCCGGATT------
TGAACCGGATTAATGAA
 A C G T A T C G A G T C A C G T A G T C G T A C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCTCCGGATT--
----CGGATTAN
 A T C G A G T C A C G T A G T C G T A C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTCCGGATT
GCTCGGSCTC
 A T C G A G T C A C G T A G T C G T A C A C T G A C T G C G T A A C G T A C G T
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCGGATT
NGCTN------
 A C G T A T C G A G T C A C G T A G T C G T A C A C T G A C T G C G T A A C G T A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTCCGGATT---
TTGCCCGGATTAGG
 A C G T A T C G A G T C A C G T A G T C G T A C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G