Information for 9-AGGCTTGTCT (Motif 29)

T G C A A C T G A T C G G T A C A G C T A G C T C T A G G C A T T G A C C G A T
Reverse Opposite:
G C T A A C T G C G T A G A T C C T G A T C G A C A T G T A G C A G T C A C G T
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.710
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.34%
Number of Background Sequences with motif509.3
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets56.4 +/- 31.5bp
Average Position of motif in Background50.9 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AGGCTTGTCT--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T T G C A A C T G A T C G G T A C A G C T A G C T C T A G G C A T T G A C C G A T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGGCTTGTCT
CNAGGCCT----
 A C G T A C G T T G C A A C T G A T C G G T A C A G C T A G C T C T A G G C A T T G A C C G A T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGGCTTGTCT--
----TWGTCTGV
 T G C A A C T G A T C G G T A C A G C T A G C T C T A G G C A T T G A C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGGCTTGTCT--
--VBSYGTCTGG
 T G C A A C T G A T C G G T A C A G C T A G C T C T A G G C A T T G A C C G A T A C G T A C G T
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGGCTTGTCT--
----CTGTCTGG
 T G C A A C T G A T C G G T A C A G C T A G C T C T A G G C A T T G A C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGGCTTGTCT-
----NTGTCAN
 T G C A A C T G A T C G G T A C A G C T A G C T C T A G G C A T T G A C C G A T A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGCTTGTCT-
-NCCTTATCTG
 T G C A A C T G A T C G G T A C A G C T A G C T C T A G G C A T T G A C C G A T A C G T
A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGGCTTGTCT
CTAGGCCT----
 A C G T A C G T T G C A A C T G A T C G G T A C A G C T A G C T C T A G G C A T T G A C C G A T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGGCTTGTCT
--TCTTATCT
 T G C A A C T G A T C G G T A C A G C T A G C T C T A G G C A T T G A C C G A T
A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGCTTGTCT
AAGGCAAGTGT
 A C G T T G C A A C T G A T C G G T A C A G C T A G C T C T A G G C A T T G A C C G A T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T