p-value: | 1e-10 |
log p-value: | -2.373e+01 |
Information Content per bp: | 1.825 |
Number of Target Sequences with motif | 28.0 |
Percentage of Target Sequences with motif | 3.92% |
Number of Background Sequences with motif | 386.0 |
Percentage of Background Sequences with motif | 0.85% |
Average Position of motif in Targets | 47.8 +/- 21.0bp |
Average Position of motif in Background | 49.3 +/- 37.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGCAAGCACA- -CCAGGAACAG |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGCAAGCACA-- --CAAGGHCANV |
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RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGCAAGCACA-- --AAACCACANN |
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RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGCAAGCACA- -NAAACCACAG |
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PB0208.1_Zscan4_2/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGCAAGCACA------- -CGAAGCACACAAAATA |
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RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGCAAGCACA-- --AAACCACAGC |
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ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGCAAGCACA-- AGGAAACAGCTG |
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RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGCAAGCACA--- -NWAACCACADNN |
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RUNX1/MA0002.2/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGCAAGCACA--- --AAACCACAGAN |
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FOXP1/MA0481.1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGCAAGCACA- CAAAAGTAAACAAAG |
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