Information for 12-CCCTGCWGGAGAGYVA (Motif 20)

A T G C G T A C G T A C C G A T A T C G A G T C C G A T A C T G A T C G C G T A C T A G C G T A A T C G G A C T T A C G C T G A
Reverse Opposite:
A G C T A G T C C T G A T A G C G C A T A G T C C G A T A T G C G T A C C G T A T C A G T A G C C G T A A C T G C A T G A T C G
p-value:1e-10
log p-value:-2.451e+01
Information Content per bp:1.655
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif140.2
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets54.3 +/- 28.7bp
Average Position of motif in Background47.7 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGCWGGAGAGYVA
DCHCAGCAGGRGGCC--
 A C G T A T G C G T A C G T A C C G A T A T C G A G T C C G A T A C T G A T C G C G T A C T A G C G T A A T C G G A C T T A C G C T G A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCTGCWGGAGAGYVA
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A T G C G T A C G T A C C G A T A T C G A G T C C G A T A C T G A T C G C G T A C T A G C G T A A T C G G A C T T A C G C T G A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCCTGCWGGAGAGYVA
CACAGCAGGGGG----
 A T G C G T A C G T A C C G A T A T C G A G T C C G A T A C T G A T C G C G T A C T A G C G T A A T C G G A C T T A C G C T G A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCTGCWGGAGAGYVA
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A T G C G T A C G T A C C G A T A T C G A G T C C G A T A C T G A T C G C G T A C T A G C G T A A T C G G A C T T A C G C T G A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCTGCWGGAGAGYVA
--CAGCTGNT------
 A T G C G T A C G T A C C G A T A T C G A G T C C G A T A C T G A T C G C G T A C T A G C G T A A T C G G A C T T A C G C T G A
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGCWGGAGAGYVA
NNVCAGCTGB-------
 A C G T A T G C G T A C G T A C C G A T A T C G A G T C C G A T A C T G A T C G C G T A C T A G C G T A A T C G G A C T T A C G C T G A
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCCTGCWGGAGAGYVA
GAGCACAGCAGGACA----
 A C G T A C G T A C G T A T G C G T A C G T A C C G A T A T C G A G T C C G A T A C T G A T C G C G T A C T A G C G T A A T C G G A C T T A C G C T G A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCTGCWGGAGAGYVA
NNVVCAGCTGBN------
 A C G T A C G T A T G C G T A C G T A C C G A T A T C G A G T C C G A T A C T G A T C G C G T A C T A G C G T A A T C G G A C T T A C G C T G A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCCTGCWGGAGAGYVA
-NCAGCTGCTG-----
 A T G C G T A C G T A C C G A T A T C G A G T C C G A T A C T G A T C G C G T A C T A G C G T A A T C G G A C T T A C G C T G A
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCCTGCWGGAGAGYVA
----CCWGGAATGY--
 A T G C G T A C G T A C C G A T A T C G A G T C C G A T A C T G A T C G C G T A C T A G C G T A A T C G G A C T T A C G C T G A
A C G T A C G T A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T